Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
163
candidate regulatory elements
104
target gene predictions
92
chromatin state
57
accessible chromatin
39
gene expression
27
binding sites
18
differential activity
18
variant allelic effects
16
histone modifications
9
Fine-mapped variants
9
eQTL
3
caQTL
Date released
16
June, 2020
16
November, 2021
10
January, 2020
4
February, 2024
3
April, 2020
3
November, 2019
2
September, 2022
1
February, 2021
1
February, 2023
1
May, 2020
Available data
57
bed bed3+
37
bigWig
Organism
57
Homo sapiens
Biosample type
36
primary cell
14
tissue
6
cell line
1
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
38
AMP
16
ENCODE
3
LungMap
Genome assembly (visualization)
57
hg19
36
GRCh38
BIOSAMPLE
TYPE
57 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
primary cell
endothelial cell of hepatic sinusoid
6
cardiac fibroblast
3
colon epithelial cell
3
endothelial cell of lymphatic vessel
3
enterocyte
3
+ See 14 more…
tissue
coronary artery
3
tibial artery
3
Peyer's patch
1
ascending aorta
1
crypt of Lieberkuhn
1
+ See 5 more…
cell line
HCT-116 cell
1
HT-29
1
RKO
1
SW480
1
choroid plexus epithelial cell
1
+ See 1 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
See all biosamples
Download