Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
119
candidate regulatory elements
75
target gene predictions
69
chromatin state
46
accessible chromatin
38
gene expression
27
binding sites
18
differential activity
15
variant allelic effects
13
histone modifications
9
Fine-mapped variants
8
eQTL
3
caQTL
Date released
13
June, 2020
10
January, 2020
8
November, 2021
4
February, 2024
3
April, 2020
3
November, 2019
2
September, 2022
1
February, 2021
1
February, 2023
1
May, 2020
Available data
46
bed bed3+
29
bigWig
Organism
46
Homo sapiens
Biosample type
28
primary cell
11
tissue
6
cell line
1
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
35
AMP
8
ENCODE
3
LungMap
Genome assembly (visualization)
46
hg19
28
GRCh38
BIOSAMPLE
TYPE
46 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
primary cell
endothelial cell of hepatic sinusoid
6
cardiac fibroblast
3
colon epithelial cell
3
endothelial cell of lymphatic vessel
3
aortic endothelial cell
2
+ See 9 more…
tissue
coronary artery
3
tibial artery
3
ascending aorta
1
large intestine
1
sigmoid colon
1
+ See 2 more…
cell line
HCT-116 cell
1
HT-29
1
RKO
1
SW480
1
choroid plexus epithelial cell
1
+ See 1 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
See all biosamples
Download