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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1655
candidate regulatory elements
1348
target gene predictions
977
histone modifications
936
chromatin state
911
accessible chromatin
815
binding sites
682
gene expression
169
eQTL
167
differential activity
140
variant allelic effects
71
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
1557
February, 2021
831
September, 2022
119
May, 2021
90
October, 2022
35
August, 2017
34
May, 2022
18
August, 2021
11
February, 2024
9
May, 2019
8
April, 2019
6
January, 2020
5
October, 2019
3
May, 2020
1
March, 2020
1
November, 2019
Available data
1831
bed bed3+
861
bed bed9
40
bigBed bed9
34
bed bed9+
2
bigWig
1
bam
Organism
2728
Homo sapiens
Biosample type
1416
cell line
629
tissue
506
primary cell
176
in vitro differentiated cells
1
stem cell
Organ
136
brain
124
epithelium
104
connective tissue
98
bodily fluid
94
blood
90
kidney
88
musculature of body
84
lung
73
intestine
66
skin of body
62
heart
62
vasculature
54
limb
52
embryo
50
blood vessel
47
large intestine
44
liver
41
extraembryonic component
32
mammary gland
29
bone element
28
pancreas
28
prostate gland
25
stomach
24
lymph node
22
penis
22
placenta
20
small intestine
19
artery
19
eye
14
adrenal gland
13
adipose tissue
13
thymus
13
ureter
12
gonad
spinal cord
10
uterus
9
vein
8
testis
7
esophagus
7
spleen
6
bone marrow
6
lymphoid tissue
5
bronchus
5
lymphatic vessel
4
mouth
4
nerve
4
ovary
4
thyroid gland
4
trachea
3
skeleton
2
breast
2
tongue
2
urinary bladder
2
vagina
1
nose
1
pituitary gland
Project
2728
AMP
Genome assembly (visualization)
2726
hg19
972
GRCh38
1
hg18
organ_slims!
spinal cord
BIOSAMPLE
TYPE
2728 results
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Clear Filters
histone modifications
chromatin state
binding sites
cell line
A549
1
18
2
breast cancer cell
11
9
neuroblastoma cell
8
4
gastric cancer cell
9
2
HepG2
5
2
3
+ See 707 more…
tissue
heart
1
21
1
brain
3
18
1
stomach
1
19
kidney
2
16
1
placenta
2
14
1
+ See 170 more…
primary cell
monocyte
86
1
CD8-positive, alpha-beta T cell
30
1
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
mature neutrophil
1
7
1
+ See 156 more…
in vitro differentiated cells
neural progenitor cell
15
4
hematopoietic multipotent progenitor cell
1
10
1
T-cell acute lymphoblastic leukemia
5
3
adipocyte
1
6
1
neuroblastoma cell line
6
2
+ See 70 more…
stem cell
H1-hESC
1
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