Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1339
target gene predictions
977
histone modifications
941
chromatin state
834
accessible chromatin
817
binding sites
683
gene expression
171
eQTL
166
differential activity
74
Fine-mapped variants
60
variant allelic effects
8
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
1
representative DNase hypersensitivity sites
Date released
833
September, 2022
35
August, 2017
35
May, 2022
9
May, 2019
8
April, 2019
7
October, 2022
6
January, 2020
February, 2023
5
February, 2024
5
May, 2021
5
October, 2019
May, 2020
1
November, 2019
Available data
866
bed bed9
48
bed bed3+
37
bigBed bed9
34
bed bed9+
2
bigWig
1
bam
Organism
949
Homo sapiens
Biosample type
509
tissue
204
primary cell
191
cell line
44
in vitro differentiated cells
1
stem cell
Organ
77
kidney
76
musculature of body
72
brain
71
lung
59
intestine
54
epithelium
50
heart
49
connective tissue
48
limb
36
large intestine
35
skin of body
33
extraembryonic component
32
vasculature
28
embryo
27
blood vessel
27
bodily fluid
25
blood
24
stomach
20
small intestine
18
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
gonad
8
lymph node
8
spinal cord
7
artery
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
ovary
4
testis
4
thyroid gland
4
uterus
3
nerve
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
947
AMP
2
T1D
Genome assembly (visualization)
947
hg19
868
GRCh38
month_released!
February, 2023
May, 2020
BIOSAMPLE
TYPE
949 results
search-icon
table-tab-icon
Clear Filters
chromatin state
caQTL
tissue
heart
20
stomach
19
brain
18
kidney
16
lung
16
+ See 109 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 88 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 143 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
See all biosamples
Download