Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1516
candidate regulatory elements
1235
target gene predictions
967
histone modifications
856
chromatin state
833
accessible chromatin
803
binding sites
634
gene expression
155
eQTL
134
differential activity
128
variant allelic effects
69
Fine-mapped variants
13
caQTL
5
hQTL
3
meQTL
3
other
3
pQTL
3
sQTL
2
variant to gene
1
representative DNase hypersensitivity sites
Date released
750
September, 2022
174
February, 2024
128
May, 2021
101
November, 2021
40
March, 2020
18
January, 2021
18
May, 2020
7
October, 2022
5
February, 2023
5
September, 2023
1
January, 2022
1
May, 2022
Available data
1248
bed bed3+
Organism
1248
Homo sapiens
Biosample type
461
tissue
368
cell line
351
primary cell
65
in vitro differentiated cells
3
stem cell
Organ
124
epithelium
84
embryo
82
musculature of body
80
connective tissue
lung
76
brain
75
kidney
73
intestine
58
uterus
57
bodily fluid
55
blood
51
heart
49
limb
44
large intestine
pancreas
44
skin of body
36
extraembryonic component
34
vasculature
30
stomach
28
blood vessel
23
small intestine
22
liver
21
adrenal gland
19
mammary gland
17
placenta
16
bone element
15
prostate gland
14
thymus
13
adipose tissue
13
ureter
11
gonad
11
penis
10
artery
10
esophagus
10
pituitary gland
9
eye
9
lymph node
9
spinal cord
8
spleen
7
ovary
6
lymphoid tissue
6
thyroid gland
4
mouth
4
testis
4
vein
3
bone marrow
3
breast
3
bronchus
3
lymphatic vessel
3
nerve
3
skeleton
3
urinary bladder
2
tongue
2
vagina
1
nose
Project
1127
AMP
101
ENCODE
20
T1D
Genome assembly (visualization)
1241
hg19
282
GRCh38
organ_slims!
pancreas
lung
BIOSAMPLE
TYPE
1248 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
caQTL
tissue
stomach
21
heart
20
adrenal gland
17
small intestine
17
brain
16
+ See 103 more…
cell line
HeLa-S3
55
H1-hESC
39
K562
23
HFFc6
19
pituitary stalk
10
+ See 155 more…
primary cell
CD14-positive monocyte
19
common myeloid progenitor, CD34-positive
14
B cell
10
pericyte cell
10
CD4-positive, alpha-beta memory T cell
9
+ See 157 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
dendritic cell
6
neural progenitor cell
5
cardiomyocytes (cardiac muscle cell)
3
+ See 27 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download