Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1601
candidate regulatory elements
1308
target gene predictions
971
histone modifications
893
chromatin state
887
accessible chromatin
812
binding sites
662
gene expression
167
differential activity
165
eQTL
130
variant allelic effects
65
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
1647
February, 2021
808
September, 2022
284
June, 2020
216
November, 2021
140
May, 2021
56
January, 2020
54
May, 2020
51
February, 2024
47
August, 2021
44
November, 2022
28
January, 2021
24
February, 2023
19
April, 2020
14
May, 2022
9
November, 2019
8
October, 2019
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
3448
bed bed3+
507
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
3414
Homo sapiens
Biosample type
1140
tissue
1068
cell line
1009
primary cell
242
in vitro differentiated cells
Organ
340
epithelium
215
kidney
201
brain
193
connective tissue
180
musculature of body
150
lung
142
intestine
116
limb
heart
101
skin of body
95
pancreas
94
vasculature
84
bodily fluid
84
large intestine
81
eye
80
embryo
79
blood
73
extraembryonic component
71
blood vessel
61
liver
60
stomach
46
bone element
40
mammary gland
40
small intestine
39
prostate gland
36
penis
36
placenta
35
adrenal gland
35
ureter
33
lymph node
27
adipose tissue
26
artery
23
gonad
23
thymus
21
esophagus
18
spinal cord
17
spleen
14
uterus
12
lymphoid tissue
12
skeleton
12
testis
10
ovary
10
thyroid gland
9
lymphatic vessel
9
mouth
9
nerve
9
vein
8
bronchus
6
bone marrow
6
breast
5
tongue
4
urinary bladder
4
vagina
3
trachea
2
nose
1
pituitary gland
Project
3195
AMP
216
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
3450
hg19
476
GRCh38
organ_slims!
heart
BIOSAMPLE
TYPE
3459 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
histone modifications
accessible chromatin
tissue
stomach
40
1
3
kidney
29
2
10
brain
29
3
2
muscle of arm
33
1
lung
33
+ See 187 more…
cell line
A549
21
1
1
MCF-7
9
2
1
breast cancer cell
11
EndoC_BH1
1
8
HepG2
2
5
2
+ See 607 more…
primary cell
monocyte
86
18
CD8-positive, alpha-beta T cell
7
30
4
common myeloid progenitor, CD34-positive
27
B cell
14
6
endothelial cell
1
15
+ See 293 more…
in vitro differentiated cells
neural progenitor cell
5
15
10
hematopoietic multipotent progenitor cell
19
1
1
adipocyte
4
1
4
embryonic stem cell
1
6
neuroblastoma cell line
6
+ See 93 more…
See all biosamples
Download