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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1512
candidate regulatory elements
1282
target gene predictions
971
histone modifications
867
chromatin state
863
accessible chromatin
810
binding sites
481
gene expression
165
eQTL
124
variant allelic effects
111
differential activity
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
758
September, 2022
35
August, 2017
35
May, 2022
8
May, 2019
7
April, 2019
7
October, 2022
6
January, 2020
5
February, 2023
5
February, 2024
5
May, 2021
5
October, 2019
3
May, 2020
1
November, 2019
Available data
792
bed bed9
53
bed bed3+
38
bigBed bed9
34
bed bed9+
1
bam
1
bigWig
Organism
880
Homo sapiens
Biosample type
452
tissue
199
primary cell
184
cell line
44
in vitro differentiated cells
1
stem cell
Organ
kidney
76
musculature of body
72
brain
71
lung
59
intestine
55
epithelium
53
heart
50
connective tissue
50
limb
36
large intestine
36
vasculature
35
skin of body
33
extraembryonic component
31
blood vessel
28
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
18
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
artery
10
penis
9
eye
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
878
AMP
2
T1D
Genome assembly (visualization)
873
hg19
799
GRCh38
organ_slims!
kidney
BIOSAMPLE
TYPE
880 results
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Clear Filters
chromatin state
caQTL
tissue
heart
21
stomach
19
brain
18
lung
16
muscle of arm
16
+ See 100 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 82 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 136 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
See all biosamples
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