Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
212
accessible chromatin
122
target gene predictions
100
candidate regulatory elements
92
differential activity
53
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
3
eQTL
2
caQTL
Date released
96
September, 2022
52
February, 2021
3
August, 2017
2
January, 2020
Available data
103
bed bed3+
50
bed bed9
2
bigBed bed9
Organism
153
Homo sapiens
Biosample type
133
primary cell
15
tissue
3
in vitro differentiated cells
2
cell line
Organ
236
kidney
220
musculature of body
202
lung
183
brain
172
intestine
153
epithelium
144
limb
128
connective tissue
121
heart
110
skin of body
105
large intestine
92
extraembryonic component
85
embryo
83
vasculature
75
stomach
74
bodily fluid
68
blood
67
blood vessel
57
small intestine
45
placenta
44
ureter
43
mammary gland
42
adrenal gland
41
pancreas
40
bone element
40
liver
40
prostate gland
38
penis
31
thymus
29
adipose tissue
29
lymph node
27
eye
25
gonad
24
esophagus
24
spinal cord
21
spleen
18
artery
14
lymphoid tissue
13
testis
13
uterus
12
mouth
12
ovary
12
thyroid gland
11
vein
10
nerve
7
breast
7
skeleton
6
bronchus
6
lymphatic vessel
6
tongue
6
vagina
5
urinary bladder
4
bone marrow
2
nose
Project
153
AMP
Genome assembly (visualization)
153
hg19
50
GRCh38
BIOSAMPLE
TYPE
153 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
primary cell
foreskin keratinocyte
11
4
endothelial cell of umbilical vein
6
5
dermis blood vessel endothelial cell
6
2
bronchial epithelial cell
4
2
epithelial cell of prostate
4
2
+ See 27 more…
tissue
esophagus squamous epithelium
6
2
breast epithelium
5
2
in vitro differentiated cells
hepatocyte
2
1
cell line
colon epithelial cell
1
1
See all biosamples
Download