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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
944
chromatin state
913
accessible chromatin
817
binding sites
683
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
833
September, 2022
35
August, 2017
34
May, 2022
9
May, 2019
8
April, 2019
6
January, 2020
6
May, 2021
5
February, 2024
5
October, 2019
4
May, 2020
3
August, 2021
2
November, 2019
Available data
869
bed bed9
44
bed bed3+
40
bigBed bed9
34
bed bed9+
2
bigWig
1
bam
Organism
949
Homo sapiens
Biosample type
515
tissue
198
primary cell
191
cell line
44
in vitro differentiated cells
1
stem cell
Organ
77
kidney
74
musculature of body
72
brain
71
lung
59
intestine
53
epithelium
51
heart
50
connective tissue
50
limb
36
large intestine
35
skin of body
33
extraembryonic component
33
vasculature
28
blood vessel
28
bodily fluid
28
embryo
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
948
AMP
2
ITG
Genome assembly (visualization)
949
hg19
869
GRCh38
BIOSAMPLE
TYPE
950 results
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chromatin state
other
pQTL
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 112 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 84 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 143 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
See all biosamples
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