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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1614
candidate regulatory elements
1273
target gene predictions
966
histone modifications
916
chromatin state
901
accessible chromatin
804
binding sites
673
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
806
September, 2022
34
August, 2017
34
May, 2022
9
May, 2019
8
April, 2019
6
January, 2020
6
May, 2021
5
February, 2024
5
October, 2019
4
May, 2020
2
November, 2019
Available data
842
bed bed9
41
bed bed3+
40
bigBed bed9
34
bed bed9+
2
bigWig
1
bam
Organism
918
Homo sapiens
Biosample type
505
tissue
194
primary cell
181
cell line
38
in vitro differentiated cells
Organ
77
kidney
74
musculature of body
72
brain
71
lung
59
intestine
53
epithelium
51
heart
50
limb
48
connective tissue
36
large intestine
35
skin of body
33
extraembryonic component
33
vasculature
28
blood vessel
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
919
AMP
Genome assembly (visualization)
918
hg19
842
GRCh38
organ_slims!
embryo
BIOSAMPLE
TYPE
919 results
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Clear Filters
chromatin state
other
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 107 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 83 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 133 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
mesenchymal stem cell
2
+ See 10 more…
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