Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1540
candidate regulatory elements
1279
target gene predictions
973
histone modifications
898
accessible chromatin
873
chromatin state
808
binding sites
682
gene expression
168
eQTL
167
differential activity
139
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
763
September, 2022
82
May, 2020
60
February, 2024
34
August, 2017
34
May, 2022
9
May, 2019
8
April, 2019
6
January, 2020
5
May, 2021
5
October, 2019
3
October, 2022
1
February, 2021
1
February, 2023
1
November, 2019
Available data
799
bed bed9
162
bed bed3+
40
bigBed bed9
34
bed bed9+
6
bigWig
4
bigBed narrowPeak
1
bam
Organism
1011
Homo sapiens
Biosample type
516
tissue
272
primary cell
172
cell line
50
in vitro differentiated cells
1
stem cell
Organ
94
epithelium
93
kidney
89
brain
81
musculature of body
lung
64
connective tissue
62
intestine
61
heart
58
limb
48
vasculature
37
blood vessel
36
large intestine
36
skin of body
33
extraembryonic component
28
embryo
28
pancreas
27
bodily fluid
26
stomach
25
blood
21
liver
20
small intestine
16
mammary gland
16
placenta
16
ureter
15
adrenal gland
15
bone element
14
prostate gland
13
adipose tissue
12
artery
11
eye
11
thymus
10
penis
9
esophagus
8
gonad
8
lymph node
8
spinal cord
6
nerve
6
spleen
6
vein
5
lymphoid tissue
5
thyroid gland
4
mouth
4
ovary
4
testis
4
uterus
3
bronchus
3
skeleton
2
bone marrow
2
breast
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
1011
AMP
1
T1D
Genome assembly (visualization)
996
hg19
799
GRCh38
organ_slims!
lung
BIOSAMPLE
TYPE
1012 results
search-icon
table-tab-icon
Clear Filters
chromatin state
variant allelic effects
tissue
heart
21
2
brain
18
1
stomach
19
kidney
16
1
muscle of arm
16
1
+ See 110 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 119 more…
cell line
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
immortal human breast epithelial cell line cell
3
+ See 140 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
+ See 20 more…
stem cell
H1-hESC
1
See all biosamples
Download