Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1556
candidate regulatory elements
1256
target gene predictions
947
histone modifications
870
chromatin state
800
accessible chromatin
772
binding sites
609
gene expression
144
eQTL
141
differential activity
115
variant allelic effects
59
Fine-mapped variants
9
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
776
September, 2022
34
May, 2022
27
August, 2017
8
April, 2019
8
May, 2019
5
February, 2024
5
May, 2021
2
January, 2020
2
May, 2020
2
October, 2019
1
November, 2019
Available data
803
bed bed9
34
bed bed9+
32
bed bed3+
30
bigBed bed9
1
bam
1
bigWig
Organism
870
Homo sapiens
Biosample type
485
tissue
188
cell line
160
primary cell
36
in vitro differentiated cells
1
stem cell
Organ
77
kidney
74
musculature of body
72
brain
71
lung
59
intestine
53
epithelium
51
heart
50
limb
connective tissue
36
large intestine
35
skin of body
33
extraembryonic component
33
vasculature
blood vessel
28
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
870
AMP
Genome assembly (visualization)
870
hg19
803
GRCh38
organ_slims!
blood vessel
connective tissue
BIOSAMPLE
TYPE
870 results
search-icon
table-tab-icon
Clear Filters
chromatin state
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 100 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 140 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 59 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
muscle cell
2
+ See 13 more…
stem cell
H1-hESC
1
See all biosamples
Download