Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1560
candidate regulatory elements
1281
target gene predictions
929
histone modifications
872
chromatin state
871
accessible chromatin
801
binding sites
664
gene expression
167
differential activity
140
eQTL
123
variant allelic effects
38
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
773
September, 2022
176
February, 2021
171
September, 2023
95
May, 2021
78
February, 2024
49
August, 2021
34
May, 2022
32
February, 2020
29
August, 2017
29
March, 2024
13
March, 2023
12
January, 2020
11
March, 2020
9
August, 2018
8
April, 2019
5
May, 2019
5
October, 2019
3
May, 2020
2
January, 2018
1
July, 2020
1
November, 2020
Available data
803
bed bed9
621
tsv
108
txt
34
bed bed3+
34
bed bed9+
34
bigBed bed9
24
csv
11
bigWig
1
bam
Organism
1536
Homo sapiens
Biosample type
671
primary cell
546
tissue
201
cell line
117
in vitro differentiated cells
1
stem cell
Organ
306
epithelium
279
kidney
97
connective tissue
brain
85
musculature of body
72
heart
72
lung
69
vasculature
65
pancreas
62
intestine
55
limb
53
blood vessel
41
liver
38
embryo
38
large intestine
37
skin of body
33
extraembryonic component
28
bodily fluid
26
blood
26
stomach
23
adipose tissue
20
small intestine
19
bone element
16
artery
16
placenta
15
adrenal gland
15
mammary gland
14
prostate gland
13
ureter
11
thymus
10
eye
10
gonad
10
penis
9
esophagus
9
spinal cord
8
lymph node
7
spleen
6
lymphoid tissue
6
nerve
6
uterus
6
vein
5
lymphatic vessel
5
mouth
5
ovary
5
testis
5
thyroid gland
3
breast
3
skeleton
3
tongue
3
urinary bladder
3
vagina
2
bone marrow
2
bronchus
1
nose
1
pericardium
1
pituitary gland
Project
1365
AMP
171
KPMP
Genome assembly (visualization)
884
hg19
812
GRCh38
organ_slims!
brain
BIOSAMPLE
TYPE
1536 results
search-icon
table-tab-icon
Clear Filters
chromatin state
gene expression
primary cell
epithelial cell of proximal tubule
1
16
glomerular endothelial cell
1
14
monocyte
15
hepatocyte
1
13
common myeloid progenitor, CD34-positive
13
+ See 240 more…
tissue
heart
21
3
kidney
16
7
stomach
19
1
lung
16
1
muscle of arm
16
+ See 119 more…
cell line
A549
18
H1-hESC
1
8
EndoC_BH1
8
K562
7
MCF-7
5
+ See 140 more…
in vitro differentiated cells
cardiomyocytes
11
hematopoietic multipotent progenitor cell
10
1
neural progenitor cell
4
7
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
+ See 34 more…
stem cell
H1-hESC
1
See all biosamples
Download