Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1459
candidate regulatory elements
1169
target gene predictions
943
histone modifications
833
chromatin state
768
binding sites
689
accessible chromatin
427
gene expression
165
eQTL
99
variant allelic effects
75
differential activity
74
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
731
September, 2022
35
May, 2022
28
August, 2017
9
May, 2019
8
April, 2019
6
October, 2022
5
February, 2024
5
May, 2021
5
October, 2019
4
February, 2023
4
January, 2020
3
May, 2020
1
November, 2019
Available data
765
bed bed9
44
bed bed3+
38
bigBed bed9
34
bed bed9+
2
bigWig
1
bam
Organism
844
Homo sapiens
Biosample type
454
tissue
187
cell line
159
primary cell
43
in vitro differentiated cells
1
stem cell
Organ
77
kidney
76
musculature of body
72
brain
71
lung
intestine
epithelium
53
heart
50
connective tissue
50
limb
36
large intestine
36
vasculature
35
skin of body
33
extraembryonic component
31
blood vessel
28
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
18
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
artery
10
penis
9
eye
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
842
AMP
2
T1D
Genome assembly (visualization)
838
hg19
771
GRCh38
organ_slims!
intestine
epithelium
BIOSAMPLE
TYPE
844 results
search-icon
table-tab-icon
Clear Filters
chromatin state
caQTL
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 96 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 139 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 59 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 14 more…
stem cell
H1-hESC
1
See all biosamples
Download