Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1560
candidate regulatory elements
1298
target gene predictions
975
histone modifications
889
accessible chromatin
887
chromatin state
815
binding sites
676
gene expression
167
differential activity
161
eQTL
130
variant allelic effects
65
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
780
September, 2022
35
August, 2017
34
May, 2022
8
April, 2019
7
May, 2019
6
January, 2020
5
February, 2024
5
May, 2021
5
October, 2019
1
May, 2020
1
November, 2019
Available data
812
bed bed9
40
bed bed3+
36
bigBed bed9
34
bed bed9+
2
bigWig
1
bam
Organism
887
Homo sapiens
Biosample type
456
tissue
196
primary cell
190
cell line
44
in vitro differentiated cells
1
stem cell
Organ
77
kidney
74
musculature of body
72
brain
71
lung
59
intestine
53
epithelium
51
heart
limb
48
connective tissue
36
large intestine
35
skin of body
33
extraembryonic component
33
vasculature
28
blood vessel
28
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
887
AMP
Genome assembly (visualization)
887
hg19
812
GRCh38
organ_slims!
limb
esophagus
BIOSAMPLE
TYPE
887 results
search-icon
table-tab-icon
Clear Filters
chromatin state
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 96 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 82 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 142 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
See all biosamples
Download