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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
944
chromatin state
913
accessible chromatin
817
binding sites
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
110
September, 2023
65
January, 2020
54
February, 2024
54
May, 2020
51
March, 2023
44
November, 2022
30
August, 2021
28
January, 2021
26
February, 2023
26
May, 2021
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
903
bed bed3+
528
bigWig
158
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1035
Homo sapiens
Biosample type
636
primary cell
202
tissue
173
cell line
69
in vitro differentiated cells
Organ
304
epithelium
106
kidney
102
connective tissue
98
pancreas
59
eye
54
vasculature
42
brain
38
blood vessel
28
liver
28
musculature of body
26
heart
21
intestine
20
limb
15
bone element
15
lung
13
artery
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
adipose tissue
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adrenal gland
7
mammary gland
6
lymphatic vessel
5
gonad
5
prostate gland
4
esophagus
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
691
AMP
222
ENCODE
110
KPMP
29
T1D
19
LungMap
9
community
Genome assembly (visualization)
905
hg19
392
GRCh38
annotation_type!
gene expression
caQTL
BIOSAMPLE
TYPE
1080 results
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Clear Filters
accessible chromatin
differential activity
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 279 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 98 more…
cell line
EndoC_BH1
8
3
induced pluripotent stem cell
7
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 149 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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