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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1218
target gene predictions
977
histone modifications
944
chromatin state
817
binding sites
643
accessible chromatin
512
gene expression
166
eQTL
139
variant allelic effects
74
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
65
January, 2020
54
May, 2020
53
February, 2024
44
November, 2022
42
March, 2023
30
August, 2021
26
February, 2023
26
May, 2021
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
633
bed bed3+
259
bigWig
48
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
646
Homo sapiens
Biosample type
256
primary cell
202
tissue
164
cell line
69
in vitro differentiated cells
Organ
145
epithelium
75
pancreas
60
connective tissue
55
eye
47
kidney
42
brain
32
vasculature
25
blood vessel
24
liver
20
heart
20
limb
20
musculature of body
13
bone element
12
blood
12
bodily fluid
11
artery
10
embryo
10
intestine
9
adipose tissue
8
lymph node
8
skeleton
8
skin of body
7
large intestine
6
extraembryonic component
6
lung
5
prostate gland
4
gonad
4
mammary gland
4
ureter
3
nerve
3
penis
3
stomach
2
esophagus
2
lymphoid tissue
2
placenta
2
spinal cord
2
spleen
2
testis
2
uterus
2
vein
1
adrenal gland
1
breast
1
bronchus
1
lymphatic vessel
1
mouth
1
nose
1
ovary
1
small intestine
1
thymus
1
thyroid gland
1
tongue
1
trachea
1
urinary bladder
Project
691
AMP
222
ENCODE
110
KPMP
29
T1D
19
LungMap
9
community
Genome assembly (visualization)
635
hg19
169
GRCh38
BIOSAMPLE
TYPE
691 results
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Clear Filters
accessible chromatin
differential activity
primary cell
monocyte
17
hepatocyte
7
pancreatic beta cell
4
3
pancreatic alpha cell
3
3
pancreatic ductal cell
3
3
+ See 127 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 98 more…
cell line
EndoC_BH1
8
1
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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