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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
944
chromatin state
817
binding sites
683
gene expression
624
accessible chromatin
169
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
June, 2020
222
November, 2021
110
September, 2023
65
January, 2020
54
February, 2024
54
May, 2020
51
March, 2023
44
November, 2022
30
August, 2021
28
January, 2021
26
February, 2023
26
May, 2021
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
615
bed bed3+
528
bigWig
158
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
746
Homo sapiens
Biosample type
583
primary cell
139
tissue
48
in vitro differentiated cells
21
cell line
Organ
279
epithelium
94
pancreas
91
kidney
82
connective tissue
53
eye
48
vasculature
34
blood vessel
23
liver
22
musculature of body
21
brain
21
heart
14
limb
11
intestine
10
artery
10
bone element
9
lung
8
adipose tissue
8
skeleton
6
adrenal gland
5
lymphatic vessel
5
skin of body
5
stomach
3
extraembryonic component
3
large intestine
3
mammary gland
3
ureter
2
bone marrow
2
bronchus
2
embryo
2
esophagus
2
nerve
2
placenta
2
small intestine
1
gonad
1
ovary
1
spleen
1
thymus
1
thyroid gland
1
uterus
1
vein
Project
402
AMP
222
ENCODE
110
KPMP
29
T1D
19
LungMap
9
community
Genome assembly (visualization)
617
hg19
392
GRCh38
month_released!
June, 2020
BIOSAMPLE
TYPE
791 results
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accessible chromatin
differential activity
primary cell
fibroblast
16
monocyte
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 247 more…
tissue
retina
22
pigmented layer of retina
20
kidney
9
islet of Langerhans
5
liver
3
1
+ See 62 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 11 more…
cell line
EndoC_BH1
8
3
induced pluripotent stem cell
7
HepG2
1
glomerular visceral epithelial cell
1
smooth muscle cell of the coronary artery
1
See all biosamples
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