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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
484
accessible chromatin
478
gene expression
372
target gene predictions
328
candidate regulatory elements
210
histone modifications
197
chromatin state
152
differential activity
100
binding sites
81
variant allelic effects
44
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
171
September, 2023
160
September, 2022
122
February, 2021
68
May, 2021
47
February, 2024
27
May, 2022
25
August, 2021
16
February, 2020
13
March, 2023
9
August, 2018
6
August, 2017
4
March, 2020
2
January, 2020
2
October, 2019
1
July, 2020
1
March, 2024
1
November, 2020
Available data
437
tsv
164
bed bed9
108
txt
27
bed bed9+
9
bigWig
6
bed bed3+
4
bigBed bed9
Organism
675
Homo sapiens
Biosample type
675
primary cell
621
tissue
212
cell line
118
in vitro differentiated cells
1
stem cell
Organ
282
epithelium
198
kidney
58
connective tissue
47
vasculature
31
blood vessel
24
pancreas
21
liver
18
skin of body
9
musculature of body
8
extraembryonic component
8
mammary gland
7
artery
7
heart
6
penis
5
lung
5
lymphatic vessel
5
vein
4
brain
4
embryo
3
eye
2
bone element
2
bone marrow
2
bronchus
2
prostate gland
1
adipose tissue
1
esophagus
1
mouth
1
pericardium
1
placenta
1
spinal cord
Project
504
AMP
171
KPMP
Genome assembly (visualization)
209
hg19
173
GRCh38
BIOSAMPLE
TYPE
675 results
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gene expression
chromatin state
primary cell
epithelial cell of proximal tubule
16
1
glomerular endothelial cell
14
1
monocyte
15
hepatocyte
13
1
common myeloid progenitor, CD34-positive
13
B cell
2
8
T-helper 1 cell
7
3
T-helper 17 cell
7
3
regulatory T cell
7
3
CD4-positive, alpha-beta memory T cell
9
endothelial cell
9
CD8-positive, alpha-beta memory T cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
mature neutrophil
7
T-helper 2 cell
3
3
glomerular visceral epithelial cell
5
1
kidney interstitial cell
6
mononuclear cell
6
CD14-positive, CD16-negative classical monocyte
5
alternatively activated macrophage
1
4
endothelial cell of umbilical vein
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
natural killer cell
2
3
CD14-positive monocyte
4
CD8-positive, alpha-beta T cell
3
1
T cell
4
endothelial cell of hepatic sinusoid
4
fibroblast of lung
4
foreskin keratinocyte
4
gamma-delta T cell
4
inflammatory macrophage
1
3
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
nephron progenitor
4
skeletal muscle myoblast
1
3
skeletal muscle satellite cell
2
2
trophoblast cell
4
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
Afferent / Efferent Arteriole Endothelial Cell
3
B Cell
3
CD4-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Peritubular Capillary Endothelial Cell
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Degenerative Vascular Smooth Muscle Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Glomerular Capillary Endothelial Cell
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
Lymphatic Endothelial Cell
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Peritubular Capillary Endothelial Cell
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
S-shaped body
3
T Cell
3
Transitional Principal-Intercalated Cell
3
Vascular Smooth Muscle Cell / Pericyte
3
adult endothelial progenitor cell
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
keratinocyte
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
kidney tubule cell
1
2
mammary gland epithelial cell
3
memory B cell
3
naive T cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neurosphere
3
osteoblast
2
1
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
3
pancreatic ductal cell
3
Kupffer cell
2
T follicular helper cell
2
astrocyte
1
1
bronchial epithelial cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
epithelial cell of prostate
2
erythroblast
2
fibroblast of breast
2
hepatic stellate cell
1
1
kidney epithelial cell
1
1
kidney glomerular epithelial cell
1
1
kidney inner medulla collecting duct intercalated cell
2
leukocyte
2
macrophage
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
mesenchymal stem cell
1
1
myoepithelial cell of mammary gland
2
naive B cel
2
neutrophil
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
renal cortical epithelial cell
1
1
renal vesicle
2
skeletal muscle fiber
2
skin fibroblast
2
vascular associated smooth muscle cell
2
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
CD1c-positive myeloid dendritic cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Schwann cell
1
activated pancreatic stellate cell
1
adipocyte
1
alpha-beta T cell
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
brain microvascular endothelial cell
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cholangiocyte
1
choroid plexus epithelial cell
1
cytotoxic T cell
1
dendritic cell
1
effector CD8-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
endothelial cell of coronary artery
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of distal tubule
1
epithelial cell of esophagus
1
erythroid lineage cell
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin fibroblast
1
foreskin melanocyte
1
glial cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
luminal epithelial cell of mammary gland
1
lung microvascular endothelial cell
1
mammary epithelial cell
1
mammary stem cell
1
mast cell
1
mature B cell
1
mature eosinophil
1
mesenchymal cell
1
mesenchymal stem cell of adipose
1
meso-epithelial cell
1
myeloid dendritic cell
1
naive B cell
1
naive regulatory T cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neural cell
1
non-pigmented ciliary epithelial cell
1
pancreatic MUC5B+ductal cell
1
pancreatic alpha+beta cell
1
pancreatic cell
1
pancreatic cycling alpha cell
1
pancreatic endothelial cell
1
pancreatic epsilon cell
1
pancreatic gamma+epsilon cell
1
pancreatic macrophage cell
1
pancreatic mast cell
1
pericardium fibroblast
1
pericyte cell
1
plasma cell
1
proximal tubule
1
pulmonary artery endothelial cell
1
quiescent pancreatic stellate cell
1
regular cardiac myocyte
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal connecting tubule
1
renal principal cell
1
retinal pigment epithelial cell
1
skeletal muscle cell
1
smooth muscle cell
1
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
1
stromal cell of bone marrow
1
type I muscle cell
1
type II muscle cell
1
ureteric bud
1
See all biosamples
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