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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
944
chromatin state
913
accessible chromatin
817
binding sites
683
gene expression
169
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
851
February, 2021
289
June, 2020
222
November, 2021
140
May, 2021
110
September, 2023
65
January, 2020
54
February, 2024
54
May, 2020
51
March, 2023
47
August, 2021
44
November, 2022
28
January, 2021
26
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
12
September, 2022
9
October, 2019
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
1879
bed bed3+
528
bigWig
158
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
2012
Homo sapiens
Biosample type
846
primary cell
757
cell line
291
tissue
163
in vitro differentiated cells
Organ
332
epithelium
127
connective tissue
112
kidney
104
pancreas
90
brain
63
eye
62
vasculature
44
blood vessel
42
liver
37
bodily fluid
36
blood
35
musculature of body
32
heart
29
intestine
26
skin of body
23
embryo
22
limb
21
bone element
19
lung
18
artery
15
large intestine
14
extraembryonic component
12
lymph node
12
mammary gland
12
prostate gland
10
adipose tissue
9
stomach
8
penis
8
skeleton
7
adrenal gland
7
lymphatic vessel
7
placenta
6
gonad
5
uterus
4
bone marrow
4
bronchus
4
esophagus
4
ureter
3
lymphoid tissue
3
nerve
3
small intestine
3
testis
3
thymus
3
trachea
3
vein
2
ovary
2
spinal cord
2
spleen
2
thyroid gland
1
breast
1
mouth
1
nose
1
pituitary gland
1
tongue
1
urinary bladder
Project
1668
AMP
222
ENCODE
110
KPMP
29
T1D
19
LungMap
9
community
Genome assembly (visualization)
1881
hg19
497
GRCh38
BIOSAMPLE
TYPE
2057 results
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Clear Filters
histone modifications
accessible chromatin
differential activity
primary cell
monocyte
86
18
CD8-positive, alpha-beta T cell
30
4
endothelial cell
1
15
fibroblast
16
excitatory neuron
12
+ See 322 more…
cell line
EndoC_BH1
1
8
3
breast cancer cell
11
Rhabdomyosarcoma
8
1
gastric cancer cell
9
neuroblastoma cell
8
+ See 519 more…
tissue
retina
1
23
pigmented layer of retina
20
kidney
2
10
islet of Langerhans
1
6
liver
2
4
1
+ See 156 more…
in vitro differentiated cells
neural progenitor cell
15
10
embryonic stem cell
1
6
neuroblastoma cell line
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
+ See 75 more…
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