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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1601
candidate regulatory elements
1308
target gene predictions
971
histone modifications
893
chromatin state
887
accessible chromatin
812
binding sites
662
gene expression
167
differential activity
163
eQTL
130
variant allelic effects
65
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
844
February, 2021
284
June, 2020
216
November, 2021
140
May, 2021
56
January, 2020
54
May, 2020
49
February, 2024
47
August, 2021
44
November, 2022
28
January, 2021
24
February, 2023
19
April, 2020
14
May, 2022
12
September, 2022
9
November, 2019
8
October, 2019
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
1847
bed bed3+
507
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1813
Homo sapiens
Biosample type
741
cell line
687
primary cell
267
tissue
163
in vitro differentiated cells
Organ
240
epithelium
113
connective tissue
90
brain
71
pancreas
63
eye
56
kidney
44
vasculature
38
liver
37
bodily fluid
36
blood
34
musculature of body
32
blood vessel
heart
29
intestine
26
skin of body
23
embryo
22
limb
21
bone element
19
lung
16
artery
15
large intestine
14
extraembryonic component
12
lymph node
12
mammary gland
12
prostate gland
9
stomach
8
adipose tissue
8
penis
8
skeleton
7
adrenal gland
7
placenta
6
gonad
5
lymphatic vessel
5
uterus
4
bone marrow
4
bronchus
4
esophagus
4
ureter
3
lymphoid tissue
3
nerve
3
small intestine
3
testis
3
thymus
3
trachea
3
vein
2
ovary
2
spinal cord
2
spleen
2
thyroid gland
1
breast
1
mouth
1
nose
1
pituitary gland
1
tongue
1
urinary bladder
Project
1594
AMP
216
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
1849
hg19
476
GRCh38
organ_slims!
heart
BIOSAMPLE
TYPE
1858 results
search-icon
table-tab-icon
Clear Filters
histone modifications
accessible chromatin
cell line
breast cancer cell
11
EndoC_BH1
1
8
Rhabdomyosarcoma
8
1
gastric cancer cell
9
neuroblastoma cell
8
+ See 516 more…
primary cell
monocyte
86
18
CD8-positive, alpha-beta T cell
30
4
endothelial cell
1
15
fibroblast
16
excitatory neuron
12
+ See 255 more…
tissue
retina
1
23
pigmented layer of retina
20
kidney
2
10
islet of Langerhans
1
6
liver
2
4
+ See 146 more…
in vitro differentiated cells
neural progenitor cell
15
10
embryonic stem cell
1
6
neuroblastoma cell line
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
+ See 75 more…
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