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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1354
target gene predictions
977
histone modifications
942
chromatin state
817
binding sites
674
gene expression
385
accessible chromatin
171
eQTL
167
differential activity
136
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
836
September, 2022
289
June, 2020
197
February, 2024
152
May, 2021
111
November, 2021
44
March, 2020
33
November, 2022
28
January, 2021
19
May, 2020
13
August, 2021
7
May, 2022
6
February, 2023
5
September, 2023
1
January, 2020
1
January, 2022
Available data
2262
bed bed3+
bigWig
12
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1741
Homo sapiens
Biosample type
600
tissue
558
cell line
459
primary cell
122
in vitro differentiated cells
3
stem cell
Organ
171
epithelium
113
connective tissue
97
brain
94
embryo
91
musculature of body
90
kidney
84
lung
83
intestine
70
bodily fluid
67
blood
60
uterus
56
pancreas
55
limb
54
heart
52
skin of body
51
large intestine
42
extraembryonic component
41
vasculature
33
blood vessel
33
stomach
32
eye
31
liver
24
small intestine
23
mammary gland
22
adrenal gland
21
bone element
20
prostate gland
19
placenta
17
lymph node
15
adipose tissue
15
gonad
15
thymus
14
penis
14
ureter
12
esophagus
11
artery
11
spinal cord
10
pituitary gland
9
spleen
8
lymphoid tissue
8
ovary
7
thyroid gland
6
testis
5
mouth
5
vein
4
breast
4
bronchus
4
lymphatic vessel
4
nerve
4
urinary bladder
3
bone marrow
3
skeleton
3
tongue
2
nose
2
vagina
1
trachea
Project
1600
AMP
111
ENCODE
29
T1D
2
ITG
Genome assembly (visualization)
1734
hg19
306
GRCh38
files.file_type!
bigWig
BIOSAMPLE
TYPE
1742 results
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Clear Filters
target gene predictions
accessible chromatin
pQTL
tissue
stomach
21
3
heart
20
2
adrenal gland
17
1
small intestine
17
1
brain
16
1
+ See 119 more…
cell line
HeLa-S3
55
H1-hESC
39
1
K562
23
1
A549
19
1
HFFc6
19
+ See 241 more…
primary cell
CD14-positive monocyte
19
common myeloid progenitor, CD34-positive
14
B cell
10
pericyte cell
10
CD4-positive, alpha-beta memory T cell
9
+ See 201 more…
in vitro differentiated cells
neural progenitor cell
5
10
hematopoietic multipotent progenitor cell
10
1
adipocyte
6
3
embryonic stem cell
1
6
dendritic cell
6
+ See 47 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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