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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
913
accessible chromatin
904
chromatin state
817
binding sites
683
gene expression
169
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
833
September, 2022
34
May, 2022
31
August, 2017
5
February, 2024
3
August, 2021
1
April, 2019
Available data
869
bed bed9
42
bed bed3+
bigBed bed9
34
bed bed9+
2
bigWig
1
bam
Organism
907
Homo sapiens
Biosample type
483
tissue
193
primary cell
191
cell line
39
in vitro differentiated cells
1
stem cell
Organ
75
kidney
71
lung
71
musculature of body
66
brain
59
intestine
51
epithelium
48
connective tissue
46
limb
41
heart
36
large intestine
35
skin of body
33
extraembryonic component
28
bodily fluid
28
embryo
25
blood
25
vasculature
24
stomach
20
blood vessel
20
small intestine
16
liver
16
placenta
15
bone element
15
mammary gland
15
pancreas
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
penis
9
adipose tissue
9
eye
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
artery
6
spleen
5
lymphoid tissue
4
mouth
4
ovary
4
testis
4
thyroid gland
4
uterus
3
nerve
3
skeleton
3
vein
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
905
AMP
2
ITG
Genome assembly (visualization)
907
hg19
838
GRCh38
files.file_type!
bigBed bed9
BIOSAMPLE
TYPE
907 results
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Clear Filters
chromatin state
pQTL
tissue
heart
19
stomach
19
brain
16
lung
16
muscle of arm
16
+ See 110 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 82 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 143 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
neural progenitor cell
4
endodermal cell
2
mesenchymal stem cell
2
+ See 14 more…
stem cell
H1-hESC
1
See all biosamples
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