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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
643
binding sites
584
histone modifications
399
target gene predictions
327
candidate regulatory elements
191
chromatin state
163
accessible chromatin
21
gene expression
10
differential activity
10
eQTL
4
variant allelic effects
Date released
579
February, 2021
184
September, 2022
168
February, 2024
48
May, 2021
4
March, 2020
Available data
983
bed bed3+
Organism
983
Homo sapiens
Biosample type
983
cell line
607
tissue
582
primary cell
159
in vitro differentiated cells
3
stem cell
Organ
80
bodily fluid
77
blood
69
embryo
55
uterus
29
lung
27
brain
20
skin of body
15
prostate gland
13
bone element
13
lymph node
12
liver
11
connective tissue
11
intestine
11
large intestine
10
mammary gland
10
pituitary gland
9
kidney
8
epithelium
6
pancreas
5
musculature of body
4
penis
4
vasculature
3
heart
3
lymphoid tissue
2
blood vessel
2
eye
2
limb
1
adipose tissue
1
artery
1
extraembryonic component
1
gonad
1
lymphatic vessel
1
mouth
1
placenta
1
testis
1
vein
Project
983
AMP
Genome assembly (visualization)
983
hg19
172
GRCh38
BIOSAMPLE
TYPE
983 results
search-icon
table-tab-icon
Clear Filters
histone modifications
target gene predictions
cell line
HeLa-S3
55
H1-hESC
1
39
K562
1
23
A549
1
19
HFFc6
19
breast cancer cell
11
pituitary stalk
10
GM12878
1
8
gastric cancer cell
9
H9
8
HepG2
5
3
MCF-7
2
6
Rhabdomyosarcoma
8
lymphocyte
1
7
neuroblastoma cell
8
B-lymphoblastoid cell line
6
1
diffuse intrinsic pontine glioma
6
liposarcoma
6
squamous cell lung carcinoma
6
Chondroid Chordoma
5
CyT49
1
4
esophageal adenocarcinoma
5
hESC cell
5
melanoma cell
5
HUES8
4
Jurkat
2
2
iPSC derived cell line
4
osteosarcoma
4
22Rv1
1
2
Ewing sarcoma
3
GM18507
1
2
GM19238
1
2
GM19239
1
2
GM19240
1
2
H7-hESC
1
2
HAP-1
1
2
HCT116
3
HT-29
1
2
IMR-90
1
2
KARPAS-422 cell
1
2
LoVo cell
1
2
MM.1S
1
2
NAMALWA cell
1
2
OCI-LY7
1
2
PC-9
1
2
SK-N-DZ
1
2
SK-N-SH
3
U937
1
2
endometrium adenocarcinoma
3
esophageal squamous cell carcinoma
3
glioblastoma cell
3
glioma cell
3
immortal human breast epithelial cell line cell
3
lymphoblast
3
lymphoblastoid cell line
3
A673
2
AG04449 cell
1
1
AG04450 cell
1
1
AG09309 cell
1
1
AG09319 cell
1
1
AG10803 cell
1
1
BE(2)-C
1
1
BJ cell
1
1
BJAB cell
2
CMK
1
1
COLO205
2
Caco-2 cell
1
1
EndoC_BH1
1
1
GM06990
1
1
GM12864
1
1
GM12865
1
1
GM12875
1
1
GM12891
1
1
GM12892
1
1
GM18505
1
1
GM19099
1
1
GM19193
1
1
GM23248
1
1
HCT-116 cell
1
1
HEK293
1
1
HK-2 cell
1
1
HL-60
1
1
HS-SY-2 cell
2
HuH-7
1
1
LHCN-M2
1
1
LNCAP
1
1
LNCaP clone FGC
2
MCF 10A cell
2
MDA-MB-231 cell
1
1
MG63
1
1
Mantle cell lymphoma
2
NCCIT cell
1
1
NT2-D1 cell
1
1
OCI-LY1
1
1
PC-3
1
1
Panc1
2
RPMI8226
1
1
RS4-11 cell
2
RWPE1
1
1
Rh-4 cell
2
SK-MEL-5
1
1
SK-N-MC
1
1
SW480
1
1
T47D
2
THP-1
2
VCaP cell
1
1
WERI-Rb-1
1
1
acute myeloid leukemia
2
cardiac muscle cell
2
diffuse large B-cell lymphoma
2
epithelial ovarian cancer cell
2
esophageal carcinoma
2
fibroblast cell line
1
1
fibroblast of cardiac tissue
2
glioblastoma multiforme cancer stem cell
2
hematopoietic cell
2
iPS DF 19.11
2
immortal foreskin-derived fibroblast cell line cell
2
immortal neural cell line cell
2
macrophage
1
1
metastatic melanoma
2
multiple myeloma cell line
2
pancreatic cell line
2
renal cell carcinoma
1
1
synovial sarcoma cell
2
triple-negative breast cancer
2
umbilical cord mesenchymal stem cell line cell
2
urothelium cell line
1
1
143B
1
501A
1
5637
1
697 cell
1
769-P cell
1
76NF2V cell
1
786-O cell
1
8988T
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
1
A172
1
ACC112
1
ACHN
1
AG08395 cell
1
AG08396 cell
1
AG08470 cell
1
AG20443
1
AGS cell
1
ALL-SIL cell
1
ARH-77 cell
1
AU565 cell
1
AsPC-1 cell
1
B-lymphocyte
1
BCBL-1 cell
1
BEAS-2B cell
1
BG03
1
BGC-823 cell
1
BHY cell
1
BT-474 cell
1
BT-549 cell
1
Barrett's esophagus
1
BxPC-3 cell
1
C4-2B
1
C666-1 cell
1
CA46 cell
1
CAL-33 cell
1
CAL-51 cell
1
CCRF-CEM cell
1
CFPAC-1 cell
1
CHL-1 cell
1
CHP-134 cell
1
CHP-212 cell
1
COLO 679 cell
1
COLO 741 cell
1
COLO-320 cell
1
COLO829
1
COR-L311 cell
1
CTV-1 cell
1
CWRU1
1
CaSki cell
1
Caki-1 cell
1
Caki2
1
Calu-1 cell
1
Calu-3 cell
1
Capan-1 cell
1
Capan-2 cell
1
D283 Med cell
1
D341 Med cell
1
DK cell
1
DLD-1 cell
1
DMS 114 cell
1
DMS 53 cell
1
DMS 79 cell
1
DND-41
1
DND-41 cell
1
DOHH-2 cell
1
DOHH2
1
DU 145 cell
1
Daoy
1
Daudi
1
Detroit562
1
EBC-1
1
EH
1
EJM cell
1
EL
1
ELF-1
1
ELR
1
EOL-1 cell
1
ES-I3
1
FLO-1 cell
1
FU97 cell
1
FaDu cell
1
G-401 cell
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM08714
1
GM10248
1
GM10266
1
GM10847
1
GM12866
1
GM12872
1
GM12873
1
GM18486
1
GM18508
1
GM18516
1
GM18522
1
GM18526
1
GM18951
1
GM19141
1
GM19204
1
GM23338
1
GRANTA-519 cell
1
H4
1
H54
1
HAC cell
1
HBL-2 cell
1
HBMEC cell
1
HCC-2279 cell
1
HCC-827 cell
1
HCC-95 cell
1
HCC1599 cell
1
HCC1806 cell
1
HCC1937 cell
1
HCC1954 cell
1
HCC2157 cell
1
HCC3153 cell
1
HCC70 cell
1
HCT-15 cell
1
HCT-8 cell
1
HEK293-T-REx cell
1
HEK293T
1
HEL cell
1
HNE-1 cell
1
HOS cell
1
HPAF-II cell
1
HPDE6-E6E7
1
HS-27A
1
HS-5
1
HSC-4 cell
1
HT
1
HT-1080 cell
1
HT1080
1
HTR-8/Svneo
1
HUES48
1
HUES6
1
HUES64
1
HeLa cell
1
Hep 3B cell
1
Hepa-RG cell
1
Hodgkins lymphoma
1
Hs 68 cell
1
HuCCT-1 cell
1
HuH-7.5
1
HuO9 cell
1
HuT 78 cell
1
Huh-7.5 cell
1
IM-95 cell
1
IMR-32 cell
1
J82 cell
1
JJN-3 cell
1
JVM-2 cell
1
JeKo-1
1
KATO III cell
1
KBM-7
1
KELLY
1
KG-1 cell
1
KMS-11
1
KMS-11 cell
1
KMS-28BM
1
KMS-28PE
1
KNS-62
1
KOPT-K1
1
KOPT-K1 cell
1
KYSE-140 cell
1
KYSE-150 cell
1
KYSE-510 cell
1
KYSE-70 cell
1
Kasumi-1
1
L1-S8
1
L1-S8R
1
LAN-1 cell
1
LAN-6 cell
1
LK-2
1
LN-229 cell
1
LOX-IMVI cell
1
LP1
1
LS 180 cell
1
Loucy
1
Loucy cell
1
M-07e cell
1
M059J
1
MCF-10A cell
1
MCF10A-Er-Src cell
1
MDA-MB-361 cell
1
MDA-MB-436 cell
1
MDA-MB-468 cell
1
ME-1
1
MEC-1 cell
1
MEC-2 cell
1
MEL-JUSO cell
1
MGC-803 cell
1
MHCC97-L cell
1
MIA PaCa-2 cell
1
MKN-1 cell
1
MKN-45 cell
1
MKN-7 cell
1
ML-2 cell
1
MOLM-13 cell
1
MOLM-14 cell
1
MOLP-2
1
MOLP-8 cell
1
MOLT-16 cell
1
MOLT-4 cell
1
MRC-5 cell
1
MS1 cell
1
MSTO-211H cell
1
MUTZ-3 cell
1
MV-4-11 cell
1
Merkel cell skin cancer
1
Myoblasts
1
NALM-6 cell
1
NB-1643 cell
1
NB-4 cell
1
NB-69 cell
1
NB4
1
NCI-H1048 cell
1
NCI-H1299 cell
1
NCI-H146 cell
1
NCI-H1703 cell
1
NCI-H1975 cell
1
NCI-H2009 cell
1
NCI-H2087 cell
1
NCI-H209 cell
1
NCI-H211 cell
1
NCI-H2171 cell
1
NCI-H226 cell
1
NCI-H23 cell
1
NCI-H3122 cell
1
NCI-H358 cell
1
NCI-H446 cell
1
NCI-H460 cell
1
NCI-H510A cell
1
NCI-H520 cell
1
NCI-H524 cell
1
NCI-H526 cell
1
NCI-H69 cell
1
NCI-H810 cell
1
NCI-H82 cell
1
NCI-H889 cell
1
NCI-H929
1
NCI-H929 cell
1
NCI-N87 cell
1
NGP cell
1
NHBE cell
1
NHDF cell
1
NHEK
1
NICR1446 cell
1
NTERA-2 cell
1
NUT midline carcinoma
1
Normal Human Astrocytes
1
OCI-AML3
1
OCI-LY3
1
OCUM-1 cell
1
OE19 cell
1
OE33 cell
1
OPM-2 cell
1
OS-RC-2 cell
1
OVCA-429 cell
1
OVCAR-3 cell
1
P12-ICHIKAWA cell
1
P493-6 cell
1
PA-TU-8988T cell
1
PANC-1 cell
1
PBMC cell line
1
PC-3M cell
1
PEER cell
1
PEO1
1
PF-382 cell
1
Pfeiffer
1
RCC 7860
1
RCH-ACV cell
1
RD cell
1
REC-1 cell
1
REH cell
1
RERF-GC-1B cell
1
RH-30 cell
1
RKO
1
RMG-I cell
1
RPMI7951
1
RT-112 cell
1
RWPE2
1
Raji cell
1
Ramos
1
Rh-18 cell
1
Rh-3 cell
1
Rh-5 cell
1
SAEC
1
SCC-4 cell
1
SEM
1
SET-2
1
SF-763 cell
1
SH-EP cell
1
SH-SY5Y cell
1
SJCRH30
1
SJSA1
1
SK-BR-3 cell
1
SK-MEL-2
1
SK-MEL-28
1
SK-MEL-30
1
SK-N-AS cell
1
SK-N-FI cell
1
SK-N-SH_RA
1
SK-UT-1 cell
1
SKMC
1
SMMC-7721 cell
1
SNU-16 cell
1
SNU-398 cell
1
SNU-638 cell
1
SNU-719
1
SU-DHL-4
1
SU-DHL-6
1
SUDHL10
1
SUDHL6
1
SUIT-2
1
SUM-149PT cell
1
SUM-159PT cell
1
SW 48 cell
1
SW 620 cell
1
SW 837 cell
1
Saos-2 cell
1
SiHa cell
1
T cell
1
T-47D cell
1
T24 cell
1
T98G cell
1
TC-32 cell
1
TC-71 cell
1
THP-1 cell
1
TIG-1 cell
1
TOV-21G cell
1
TT cell
1
Toledo
1
Tumor-derived cell line
1
U-251 MG cell
1
U-266 cell
1
U-87 MG
1
U2OS
1
UACC-257
1
UACC-812 cell
1
UCSF-4
1
UKE-1 cell
1
VA-ES-BJ cell
1
WI-38 cell
1
WI38
1
WSU-DLCL2 cell
1
Xenograft
1
Z-138
1
ZR-75-1 cell
1
ZR-75-30 cell
1
adenoid cystic carcinoma
1
adipocyte cell line
1
adipose tissue derived mesenchymal stem cell
1
adult T-cell lymphoma cell
1
bladder carcinoma
1
bronchial epithelial cell
1
cardiac myocyte cell derived cell line
1
cervical cancer cell line
1
chondrocyte
1
choroid plexus epithelial cell
1
chronic lymphocytic leukemia
1
cirrhosis of liver
1
colon cancer cell line
1
colon carcinoma
1
colon epithelial cell
1
colorectal cancer cell line
1
coronary artery smooth muscle cell
1
crypt
1
dermal fibroblast
1
dermis lymphatic vessel endothelial cell
1
embryonic stem cell
1
embryonic stem cell line
1
endodermal cell
1
endometrial cancer cell line
1
epithelial cell of prostate
1
esophageal epithelial cell
1
fibroblast
1
foreskin fibroblast
1
gastric adenocarcinoma
1
gastroesophageal junction
1
gastrointestinal stromal tumor cell
1
glial cell
1
glioblastoma multiforme
1
hES BG01V cell
1
hESC H9
1
hTERT-HME1 cell
1
hTERT-RPE1 cell
1
helper T-lymphocyte
1
hepatic stellate cell
1
hepatoma cell line
1
human aortic endothelial cell
1
human ovarian cancer cell line cell
1
iPS DF 19.7
1
iPS DF 4.7 Cell Line
1
iPS DF 6.9
1
iPS-11a
1
iPS-15b
1
iPS-18a
1
iPS-18c
1
iPS-20b
1
iPS-NIHi11
1
iPS-NIHi7
1
immortal endothelial cell line cell
1
immortal epidermal cell line cell
1
immortal fibroblast cell line cell
1
induced pluripotent stem cell
1
keratinocyte
1
leukemic stem cell
1
lung adenocarcinoma cell
1
lung carcinoid tumor
1
lung fibroblast
1
lung fibroblast cell line
1
lymphoma cell
1
malignant rhabdoid tumour
1
medulloblastoma
1
mesenchymal stem cell line cell
1
monocyte
1
myxoid liposarcoma
1
nasopharyngeal carcinoma cell line
1
neural crest cell
1
neural stem cell
1
neurofibromatosis
1
non-small cell lung cancer cell
1
oral epithelial cell
1
pancreatic acinar cell
1
pancreatic adenosquamous carcinoma
1
progenitor cell of endocrine pancreas
1
prostate cancer cell line
1
prostate carcinoma
1
prostate derived cell line
1
renal cancer cell line
1
renal proximal tubule epithelial cell
1
retinoblastoma cell
1
sarcoma cell line
1
skin fibroblast
1
small cell lung cancer cell
1
small cell lung carcinoma
1
smooth muscle cell of the coronary artery
1
spinal cord
1
tongue squamous cell carcinoma
1
urinary bladder cancer cell
1
vein endothelial cell
1
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