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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
484
accessible chromatin
478
gene expression
372
target gene predictions
328
candidate regulatory elements
210
histone modifications
197
chromatin state
152
differential activity
100
binding sites
81
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
162
September, 2022
160
May, 2021
111
November, 2021
94
February, 2021
28
January, 2021
16
May, 2020
6
February, 2024
3
August, 2021
1
January, 2022
1
March, 2020
Available data
582
bed bed3+
3
bigBed narrowPeak
3
bigWig
Organism
582
Homo sapiens
Biosample type
983
cell line
607
tissue
582
primary cell
159
in vitro differentiated cells
3
stem cell
Organ
131
epithelium
62
connective tissue
30
skin of body
27
pancreas
21
vasculature
15
blood vessel
12
mammary gland
11
extraembryonic component
9
heart
9
intestine
9
kidney
9
liver
9
penis
8
lung
8
musculature of body
6
artery
6
bone element
6
embryo
5
bone marrow
4
adrenal gland
4
brain
4
bronchus
4
eye
4
stomach
4
vein
3
esophagus
3
large intestine
3
lymphatic vessel
3
prostate gland
2
blood
2
bodily fluid
2
placenta
2
small intestine
2
trachea
2
uterus
1
gonad
1
limb
1
mouth
1
ovary
1
spinal cord
1
thyroid gland
Project
443
AMP
111
ENCODE
28
T1D
Genome assembly (visualization)
582
hg19
205
GRCh38
BIOSAMPLE
TYPE
582 results
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target gene predictions
histone modifications
primary cell
monocyte
2
86
CD8-positive, alpha-beta T cell
5
30
CD14-positive monocyte
19
common myeloid progenitor, CD34-positive
14
B cell
10
pericyte cell
10
CD4-positive, alpha-beta memory T cell
9
endothelial cell
7
1
CD8-positive, alpha-beta memory T cell
7
hepatocyte
3
4
keratinocyte
5
2
mononuclear cell
6
natural killer cell
5
1
olfactory receptor cell
6
smooth muscle cell
6
trophoblast cell
5
1
astrocyte
4
1
pancreatic ductal cell
3
2
regulatory T cell
4
1
T cell
4
endothelial cell of umbilical vein
4
fibroblast
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin fibroblast
2
2
foreskin keratinocyte
4
mammary epithelial cell
1
3
mammary gland epithelial cell
4
osteoblast
2
2
pancreatic delta cell
4
CD4-positive, alpha-beta T cell
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
bronchial epithelial cell
2
1
colon epithelial cell
3
epithelial cell of prostate
3
luminal epithelial cell of mammary gland
3
macrophage
3
naive T cell
3
neurosphere
3
neutrophil
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
skeletal muscle myoblast
2
1
skin fibroblast
3
type B pancreatic cell
3
CD1c-positive myeloid dendritic cell
1
1
CD4-positive helper T cell
2
T-cell
2
activated CD4-positive, alpha-beta T cell
2
acute myeloid leukemia cell
2
blood vessel smooth muscle cell
2
cortical cell of adrenal gland
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
enteric smooth muscle cell
2
erythroblast
2
fibroblast of breast
2
fibroblast of mammary gland
1
1
fibroblast of pulmonary artery
1
1
fibroblast of villous mesenchyme
1
1
gabaergic neuron
2
glutamatergic neuron
2
hepatic stellate cell
1
1
kidney tubule cell
2
mantle cell lymphoma cell
2
mast cell
1
1
megakaryocyte
2
memory B cell
2
myoepithelial cell of mammary gland
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
plasma cell
1
1
pre-B acute lymphoblastic leukemia cell
2
preadipocyte
2
pulmonary artery endothelial cell
1
1
retinal pigment epithelial cell
1
1
skeletal muscle satellite cell
2
smooth muscle cell of the esophagus
2
tracheal epithelial cell
2
type II pneumocyte
2
Adipose stromal cell
1
B cell, CD19-positive
1
B-cell lymphoma cell
1
B-lymphocyte
1
CD34-positive, CD38-negative hematopoietic stem cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD56-positive, CD161-positive immature natural killer cell
1
Ishikawa
1
Rhabdoid Tumor of the Kidney
1
Stromal Predominant Kidney Wilms Tumor
1
T-cell lymphoma cell
1
Th1 cell
1
Th17 cell
1
activated CD8-positive, alpha-beta T cell
1
acute myeloid leukemia
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
alveolar cell type II
1
alveolar macrophage
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
aortic adventitial fibroblast
1
aortic endothelial cell
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
basal cell
1
basal cell of epidermis
1
bone cell
1
bone marrow cell
1
brain microvascular endothelial cell
1
cardiac endothelial cell
1
cardiac muscle cell
1
cardiac muscle myoblast
1
cell
1
choroid plexus epithelial cell
1
chronic lymphocytic leukemia cell
1
ciliated cell
1
club cell
1
colon goblet cell
1
columnar chondrocyte
1
conventional dendritic cell
1
eccrine cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
erythroid cell
1
erythroid progenitor cell
1
fat cell
1
fibroblast of arm
1
fibroblast of gingiva
1
fibroblast of peridontal ligament
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
foreskin melanocyte
1
foveolar cell of stomach
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granular cell of epidermis
1
granulocyte
1
head and neck neoplasia
1
head and neck squamous cell carcinoma
1
inflammatory macrophage
1
intestinal epithelial cell
1
intestinal tuft cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
leukemic stem cell
1
lung microvascular endothelial cell
1
luteal cell
1
mammary stem cell
1
mature NK T cell
1
mature neutrophil
1
megakaryocyte-erythroid progenitor cell
1
melanocyte
1
meningioma cell
1
meso-epithelial cell
1
mesothelial cell
1
microglial cell
1
mononuclear cell of bone marrow
1
mycosis fungoides
1
myeloid leukocyte
1
myoepithelial cell
1
myotube
1
naive t cell
1
natural killer cell mediated cytotoxicity
1
neoplastic cell
1
neural progenitor cell
1
neuronal stem cell
1
neutrophil progenitor cell
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
non-pigmented ciliary epithelial cell
1
oligodendrocyte
1
oligodendrocyte precursor cell
1
pancreatic endocrine cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
paneth cell
1
parietal cell
1
peptic cell
1
peripheral blood
1
peripheral blood mononuclear cell
1
peripheral blood stem cell
1
plasmacytoid dendritic cell
1
prostate gland cancer cell
1
pulmonary interstitial fibroblast
1
regular atrial cardiac myocyte
1
regular cardiac myocyte
1
renal cortical epithelial cell
1
renal epithelial cell
1
renal proximal tubule cell
1
respiratory goblet cell
1
schwann cell
1
seminoma cell
1
skeletal muscle cell
1
skeletal muscle fibroblast
1
small cell ovarian carcinoma cell
1
small intestine goblet cell
1
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
1
somatic muscle myotube
1
sperm
1
stellate neuron
1
stomach neuroendocrine cell
1
stromal cell
1
stromal cell of bone marrow
1
thyroid follicular cell
1
type I cell of adrenal cortex
1
type I muscle cell
1
type I pneumocyte
1
type II cell of adrenal cortex
1
type II muscle cell
1
umbilical vein endothelial cell
1
undifferentiated pleomorphic sarcoma
1
urinary bladder cancer cell
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
1
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