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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1072
target gene predictions
872
histone modifications
811
binding sites
674
gene expression
521
accessible chromatin
167
differential activity
140
variant allelic effects
75
chromatin state
43
eQTL
6
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
1
representative DNase hypersensitivity sites
Date released
839
September, 2022
289
June, 2020
152
May, 2021
64
May, 2020
56
January, 2021
44
March, 2020
44
November, 2022
27
February, 2024
24
February, 2023
19
April, 2020
13
August, 2021
8
May, 2022
5
September, 2023
4
January, 2020
2
February, 2021
1
January, 2022
1
June, 2021
1
October, 2019
Available data
1583
bed bed3+
160
bigWig
12
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1548
Homo sapiens
Biosample type
626
tissue
457
primary cell
390
cell line
117
in vitro differentiated cells
3
stem cell
Organ
170
epithelium
100
connective tissue
98
kidney
97
brain
91
musculature of body
84
lung
73
intestine
69
pancreas
62
eye
55
limb
50
heart
47
skin of body
46
large intestine
43
embryo
42
extraembryonic component
41
bodily fluid
41
vasculature
39
blood
33
blood vessel
29
stomach
26
liver
22
bone element
22
small intestine
20
mammary gland
20
prostate gland
19
placenta
18
adrenal gland
17
lymph node
16
adipose tissue
15
thymus
14
gonad
14
penis
14
ureter
13
artery
11
spinal cord
10
esophagus
10
pituitary gland
9
spleen
8
uterus
7
lymphoid tissue
7
ovary
6
testis
6
thyroid gland
5
mouth
5
vein
4
bone marrow
4
breast
4
bronchus
4
lymphatic vessel
4
nerve
4
urinary bladder
3
skeleton
3
tongue
2
nose
2
vagina
1
trachea
Project
1518
AMP
56
T1D
19
LungMap
Genome assembly (visualization)
2262
hg19
GRCh38
assembly!
GRCh38
BIOSAMPLE
TYPE
1593 results
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Clear Filters
target gene predictions
accessible chromatin
tissue
retina
3
22
stomach
21
3
heart
20
2
pigmented layer of retina
20
adrenal gland
17
1
+ See 117 more…
primary cell
CD14-positive monocyte
19
common myeloid progenitor, CD34-positive
14
B cell
10
3
CD4-positive, alpha-beta memory T cell
9
regulatory T cell
4
5
+ See 186 more…
cell line
A549
19
1
pituitary stalk
10
EndoC_BH1
1
7
K562
7
1
MCF-7
6
1
+ See 229 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
1
adipocyte
6
4
embryonic stem cell
1
6
dendritic cell
6
retinal pigment epithelial cell
6
+ See 47 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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