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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1624
candidate regulatory elements
1300
target gene predictions
952
histone modifications
917
chromatin state
901
accessible chromatin
771
binding sites
682
gene expression
167
differential activity
167
eQTL
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
2
pQTL
1
representative DNase hypersensitivity sites
Date released
815
September, 2022
333
November, 2021
277
June, 2020
195
February, 2024
161
May, 2021
72
May, 2020
66
January, 2020
56
January, 2021
44
March, 2020
44
November, 2022
30
August, 2021
25
February, 2023
19
April, 2020
14
May, 2022
13
February, 2021
12
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
June, 2021
Available data
2191
bed bed3+
531
bigWig
12
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
2156
Homo sapiens
Biosample type
855
primary cell
715
tissue
494
cell line
134
in vitro differentiated cells
3
stem cell
Organ
334
epithelium
166
connective tissue
125
kidney
118
brain
109
pancreas
107
musculature of body
96
embryo
94
intestine
93
lung
75
heart
bodily fluid
69
limb
68
eye
67
blood
67
vasculature
61
uterus
57
skin of body
54
large intestine
51
blood vessel
45
extraembryonic component
45
liver
38
stomach
31
bone element
28
adrenal gland
26
mammary gland
26
small intestine
21
placenta
20
adipose tissue
20
prostate gland
19
artery
17
lymph node
17
ureter
16
gonad
16
thymus
14
esophagus
14
penis
11
skeleton
11
spinal cord
10
pituitary gland
10
spleen
9
ovary
8
lymphoid tissue
8
thyroid gland
7
lymphatic vessel
6
bronchus
6
nerve
6
testis
6
vein
5
bone marrow
5
mouth
4
breast
4
urinary bladder
3
tongue
2
nose
2
vagina
1
trachea
Project
1792
AMP
333
ENCODE
57
T1D
19
LungMap
Genome assembly (visualization)
2193
hg19
649
GRCh38
organ_slims!
bodily fluid
BIOSAMPLE
TYPE
2201 results
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Clear Filters
target gene predictions
accessible chromatin
primary cell
endothelial cell
7
15
fibroblast
4
16
monocyte
2
18
pericyte cell
10
10
CD14-positive monocyte
19
+ See 260 more…
tissue
retina
3
23
heart
20
5
kidney
14
10
stomach
21
3
pigmented layer of retina
20
+ See 139 more…
cell line
HeLa-S3
55
H1-hESC
39
1
A549
19
1
HFFc6
19
pituitary stalk
10
+ See 221 more…
in vitro differentiated cells
neural progenitor cell
5
10
hematopoietic multipotent progenitor cell
10
1
adipocyte
6
4
embryonic stem cell
1
6
dendritic cell
6
+ See 52 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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