Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
553
accessible chromatin
552
gene expression
440
target gene predictions
407
candidate regulatory elements
304
histone modifications
242
chromatin state
152
differential activity
138
binding sites
88
variant allelic effects
44
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
2
other
1
representative DNase hypersensitivity sites
Date released
196
September, 2022
111
November, 2021
63
May, 2021
28
January, 2021
17
May, 2020
11
March, 2020
6
February, 2024
5
September, 2023
2
February, 2021
1
January, 2022
Available data
440
bed bed3+
3
bigBed narrowPeak
3
bigWig
Organism
440
Homo sapiens
Biosample type
tissue
cell line
372
primary cell
65
in vitro differentiated cells
3
stem cell
Organ
115
epithelium
63
connective tissue
26
skin of body
24
pancreas
18
vasculature
12
blood vessel
12
embryo
11
extraembryonic component
11
mammary gland
9
kidney
8
heart
8
intestine
8
lung
7
brain
7
penis
6
musculature of body
5
liver
4
adrenal gland
4
stomach
4
vein
3
artery
3
bone element
3
bone marrow
3
bronchus
3
esophagus
3
eye
3
large intestine
3
lymphatic vessel
3
prostate gland
2
small intestine
1
adipose tissue
1
gonad
1
limb
1
mouth
1
nose
1
ovary
1
placenta
1
spinal cord
1
thyroid gland
1
uterus
Project
301
AMP
111
ENCODE
28
T1D
Genome assembly (visualization)
440
hg19
117
GRCh38
biosample_type!
cell line
tissue
BIOSAMPLE
TYPE
440 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
primary cell
CD14-positive monocyte
19
common myeloid progenitor, CD34-positive
14
B cell
10
pericyte cell
10
CD4-positive, alpha-beta memory T cell
9
+ See 169 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
dendritic cell
6
neural progenitor cell
5
cardiomyocytes (cardiac muscle cell)
3
+ See 27 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download