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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1637
candidate regulatory elements
1204
target gene predictions
972
histone modifications
930
chromatin state
810
binding sites
637
accessible chromatin
510
gene expression
164
eQTL
137
variant allelic effects
71
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
821
September, 2022
174
February, 2024
138
May, 2021
44
March, 2020
18
May, 2020
5
September, 2023
2
February, 2021
1
January, 2020
1
January, 2022
Available data
1204
bed bed3+
3
bigBed narrowPeak
3
bigWig
Organism
1204
Homo sapiens
Biosample type
515
tissue
395
cell line
226
primary cell
65
in vitro differentiated cells
3
stem cell
Organ
84
embryo
77
musculature of body
76
brain
75
kidney
75
lung
65
intestine
63
epithelium
59
connective tissue
57
bodily fluid
57
uterus
55
blood
49
limb
45
heart
41
large intestine
39
skin of body
36
extraembryonic component
30
vasculature
27
pancreas
26
stomach
25
blood vessel
21
small intestine
20
liver
17
adrenal gland
17
placenta
16
mammary gland
15
bone element
15
prostate gland
14
thymus
13
adipose tissue
13
ureter
penis
10
gonad
10
pituitary gland
9
eye
9
lymph node
9
spinal cord
8
artery
8
esophagus
8
spleen
6
lymphoid tissue
6
ovary
5
thyroid gland
4
mouth
4
testis
4
vein
3
breast
nerve
3
skeleton
3
urinary bladder
2
bone marrow
2
bronchus
2
lymphatic vessel
2
tongue
2
vagina
1
nose
Project
1204
AMP
111
ENCODE
28
T1D
Genome assembly (visualization)
1204
hg19
174
GRCh38
organ_slims!
nerve
penis
BIOSAMPLE
TYPE
1204 results
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Clear Filters
target gene predictions
tissue
stomach
21
heart
20
adrenal gland
17
lung
17
small intestine
17
+ See 110 more…
cell line
HeLa-S3
55
H1-hESC
39
K562
23
A549
19
HFFc6
19
+ See 161 more…
primary cell
CD14-positive monocyte
19
common myeloid progenitor, CD34-positive
14
B cell
10
CD4-positive, alpha-beta memory T cell
9
CD8-positive, alpha-beta memory T cell
7
+ See 99 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
dendritic cell
6
neural progenitor cell
5
cardiomyocytes (cardiac muscle cell)
3
+ See 27 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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