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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
944
chromatin state
913
accessible chromatin
817
binding sites
683
gene expression
169
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
133
May, 2020
105
February, 2024
72
March, 2020
65
January, 2020
44
November, 2022
30
August, 2021
28
January, 2021
26
February, 2023
26
May, 2021
19
April, 2020
14
May, 2022
12
February, 2021
12
November, 2019
9
October, 2019
6
September, 2022
4
January, 2022
3
October, 2022
3
September, 2018
2
March, 2023
2
November, 2020
1
June, 2021
Available data
1027
bed bed3+
532
bigWig
72
tsv
13
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1081
Homo sapiens
Biosample type
565
primary cell
319
tissue
167
cell line
75
in vitro differentiated cells
Organ
253
epithelium
110
connective tissue
95
brain
81
pancreas
66
kidney
61
eye
60
vasculature
45
heart
44
blood vessel
40
musculature of body
37
limb
31
liver
24
intestine
21
artery
16
adipose tissue
16
lung
15
bone element
14
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
10
stomach
9
extraembryonic component
8
adrenal gland
8
lymph node
8
mammary gland
8
nerve
8
skeleton
7
ureter
6
esophagus
6
prostate gland
5
gonad
5
spinal cord
4
bronchus
4
lymphatic vessel
4
placenta
3
penis
3
small intestine
3
thyroid gland
3
uterus
3
vein
2
bone marrow
2
lymphoid tissue
2
ovary
2
spleen
2
testis
2
thymus
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
856
AMP
222
ENCODE
30
T1D
19
LungMap
Genome assembly (visualization)
1101
hg19
464
GRCh38
BIOSAMPLE
TYPE
1127 results
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Clear Filters
accessible chromatin
variant allelic effects
Fine-mapped variants
primary cell
fibroblast
16
6
monocyte
18
endothelial cell
15
2
macrophage
12
3
excitatory neuron
12
+ See 230 more…
tissue
retina
23
1
pigmented layer of retina
20
kidney
10
1
islet of Langerhans
6
1
2
coronary artery
3
2
3
+ See 110 more…
cell line
EndoC_BH1
8
1
HepG2
2
MIN6
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 149 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 34 more…
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