Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1218
target gene predictions
977
histone modifications
944
chromatin state
817
binding sites
643
accessible chromatin
512
gene expression
166
eQTL
139
variant allelic effects
74
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
834
September, 2022
230
February, 2024
139
May, 2021
97
May, 2020
44
March, 2020
5
September, 2023
3
February, 2021
3
October, 2022
1
January, 2020
1
January, 2022
Available data
1341
bed bed3+
7
bigBed narrowPeak
7
bigWig
Organism
1357
Homo sapiens
Biosample type
566
tissue
403
cell line
314
primary cell
71
in vitro differentiated cells
3
stem cell
Organ
104
epithelium
93
brain
91
kidney
84
embryo
84
musculature of body
76
lung
75
connective tissue
68
intestine
57
bodily fluid
57
limb
57
uterus
55
blood
55
heart
45
vasculature
41
large intestine
40
skin of body
38
pancreas
36
extraembryonic component
34
blood vessel
28
stomach
24
liver
21
small intestine
18
adrenal gland
17
mammary gland
17
placenta
16
adipose tissue
16
prostate gland
16
ureter
15
bone element
14
thymus
12
artery
11
eye
11
penis
10
esophagus
10
gonad
10
pituitary gland
9
lymph node
9
spinal cord
8
spleen
6
lymphoid tissue
6
ovary
6
thyroid gland
5
nerve
5
vein
4
mouth
4
testis
3
breast
3
bronchus
3
skeleton
3
urinary bladder
2
bone marrow
2
lymphatic vessel
2
tongue
2
vagina
1
nose
Project
1357
AMP
111
ENCODE
29
T1D
Genome assembly (visualization)
1341
hg19
174
GRCh38
BIOSAMPLE
TYPE
1357 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
variant allelic effects
tissue
heart
20
2
stomach
21
adrenal gland
17
brain
16
1
lung
17
+ See 117 more…
cell line
HeLa-S3
55
H1-hESC
39
K562
23
A549
19
HFFc6
19
+ See 167 more…
primary cell
CD14-positive monocyte
19
common myeloid progenitor, CD34-positive
14
B cell
10
CD4-positive, alpha-beta memory T cell
9
CD8-positive, alpha-beta memory T cell
7
+ See 134 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
dendritic cell
6
neural progenitor cell
5
cardiomyocytes (cardiac muscle cell)
3
1
+ See 30 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download