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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
1072
target gene predictions
872
histone modifications
810
binding sites
674
gene expression
521
accessible chromatin
167
differential activity
140
variant allelic effects
75
chromatin state
40
eQTL
6
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
1
representative DNase hypersensitivity sites
Date released
1742
February, 2021
840
September, 2022
292
May, 2021
289
June, 2020
286
September, 2023
160
February, 2024
144
May, 2020
99
October, 2022
91
August, 2021
70
March, 2023
56
January, 2021
56
March, 2020
44
November, 2022
43
May, 2022
39
February, 2020
35
August, 2017
30
March, 2024
26
February, 2023
21
January, 2020
19
April, 2020
9
August, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2022
1
July, 2020
1
June, 2021
1
November, 2019
1
November, 2020
1
October, 2019
Available data
3451
bed bed3+
792
tsv
164
bigWig
108
txt
34
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
5
bed bed9
4
bam
3
bed gappedPeak
3
xls
Organism
4356
Homo sapiens
Biosample type
1659
cell line
1434
primary cell
978
tissue
326
in vitro differentiated cells
4
stem cell
Organ
615
epithelium
388
kidney
254
connective tissue
203
brain
192
pancreas
133
musculature of body
129
vasculature
118
bodily fluid
113
blood
100
lung
97
intestine
92
heart
91
blood vessel
82
skin of body
78
embryo
75
eye
72
limb
71
liver
62
large intestine
50
extraembryonic component
45
adipose tissue
41
bone element
39
mammary gland
37
artery
37
prostate gland
35
stomach
33
lymph node
26
penis
25
placenta
23
small intestine
20
adrenal gland
20
gonad
17
thymus
17
ureter
16
uterus
14
esophagus
14
spinal cord
12
lymphatic vessel
12
pituitary gland
12
vein
11
spleen
11
testis
9
bone marrow
9
lymphoid tissue
8
bronchus
8
nerve
8
ovary
8
thyroid gland
6
mouth
5
breast
5
trachea
5
urinary bladder
4
tongue
3
skeleton
3
vagina
2
nose
1
pericardium
Project
4032
AMP
281
KPMP
57
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5293
hg19
GRCh38
hg18
assembly!
GRCh38
hg18
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
4403 results
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Clear Filters
target gene predictions
histone modifications
binding sites
gene expression
accessible chromatin
differential activity
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
Fine-mapped variants
representative DNase hypersensitivity sites
cell line
A549
19
1
2
1
EndoC_BH1
1
1
1
8
7
3
1
breast cancer cell
11
9
H1-hESC
2
1
2
8
1
K562
7
1
2
1
1
+ See 732 more…
primary cell
CD8-positive, alpha-beta T cell
4
30
3
3
1
monocyte
2
2
1
15
5
1
2
1
1
endothelial cell
1
1
2
9
4
2
1
1
CD14-positive monocyte
19
epithelial cell of proximal tubule
1
1
16
1
+ See 379 more…
tissue
islet of Langerhans
1
1
2
11
2
1
3
10
2
2
2
heart
20
1
1
3
2
2
retina
3
1
1
1
22
1
kidney
14
2
1
7
1
1
1
stomach
21
1
1
3
+ See 226 more…
in vitro differentiated cells
adipocyte
6
1
1
1
4
4
embryonic stem cell
1
1
1
6
5
hematopoietic multipotent progenitor cell
10
1
1
1
1
neural progenitor cell
5
2
7
cardiomyocytes
11
+ See 114 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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