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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1072
target gene predictions
872
histone modifications
810
binding sites
674
gene expression
232
accessible chromatin
167
differential activity
140
variant allelic effects
75
chromatin state
40
eQTL
6
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
1
representative DNase hypersensitivity sites
Date released
2579
February, 2021
1672
September, 2022
292
May, 2021
June, 2020
286
September, 2023
162
February, 2024
144
May, 2020
99
October, 2022
91
August, 2021
70
March, 2023
56
January, 2021
56
March, 2020
44
November, 2022
43
May, 2022
39
February, 2020
35
August, 2017
30
March, 2024
26
February, 2023
21
January, 2020
19
April, 2020
9
August, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2022
1
July, 2020
1
June, 2021
1
November, 2019
1
November, 2020
1
October, 2019
Available data
4834
bed bed3+
792
tsv
164
bigWig
108
txt
34
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
5
bed bed9
4
bam
3
bed gappedPeak
3
xls
Organism
5738
Homo sapiens
Biosample type
1852
tissue
1834
cell line
1709
primary cell
384
in vitro differentiated cells
4
stem cell
Organ
690
epithelium
532
kidney
314
connective tissue
293
brain
273
musculature of body
225
lung
212
pancreas
200
intestine
173
vasculature
160
limb
157
heart
153
bodily fluid
149
skin of body
144
blood
126
blood vessel
125
embryo
124
large intestine
103
extraembryonic component
89
liver
87
eye
83
stomach
63
adipose tissue
63
mammary gland
61
bone element
59
prostate gland
59
small intestine
52
placenta
51
penis
47
adrenal gland
47
ureter
46
lymph node
44
artery
36
thymus
33
gonad
29
esophagus
28
spinal cord
25
spleen
23
uterus
18
testis
17
vein
16
lymphoid tissue
15
lymphatic vessel
15
ovary
15
thyroid gland
13
mouth
13
nerve
12
pituitary gland
11
bone marrow
11
bronchus
9
breast
7
skeleton
7
tongue
7
urinary bladder
7
vagina
4
trachea
2
nose
1
pericardium
Project
5414
AMP
281
KPMP
57
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
6676
hg19
GRCh38
hg18
assembly!
GRCh38
hg18
month_released!
June, 2020
BIOSAMPLE
TYPE
5785 results
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table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
gene expression
accessible chromatin
differential activity
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
Fine-mapped variants
representative DNase hypersensitivity sites
tissue
heart
37
20
1
1
3
2
stomach
40
21
1
1
kidney
29
14
2
1
7
1
1
brain
29
16
3
1
1
1
lung
33
17
1
+ See 232 more…
cell line
A549
21
19
1
2
EndoC_BH1
1
1
1
8
7
3
1
MCF-7
9
6
2
3
breast cancer cell
11
9
K562
7
7
1
2
1
+ See 741 more…
primary cell
CD8-positive, alpha-beta T cell
7
4
30
3
3
1
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
2
3
monocyte
2
2
1
15
3
1
2
1
1
CD14-positive monocyte
8
19
+ See 379 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
1
3
4
neural progenitor cell
5
5
2
7
embryonic stem cell
1
1
1
6
5
cardiomyocytes
11
+ See 115 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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