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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1072
target gene predictions
872
histone modifications
810
binding sites
674
gene expression
520
accessible chromatin
167
differential activity
140
variant allelic effects
42
eQTL
40
chromatin state
6
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
1
representative DNase hypersensitivity sites
Date released
2579
February, 2021
1672
September, 2022
292
May, 2021
289
June, 2020
286
September, 2023
162
February, 2024
144
May, 2020
99
October, 2022
91
August, 2021
70
March, 2023
56
January, 2021
56
March, 2020
44
November, 2022
43
May, 2022
39
February, 2020
August, 2017
30
March, 2024
26
February, 2023
21
January, 2020
19
April, 2020
9
August, 2018
2
January, 2018
2
May, 2024
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2022
1
July, 2020
June, 2021
1
November, 2019
1
November, 2020
1
October, 2019
Available data
5087
bed bed3+
794
tsv
163
bigWig
108
txt
34
bed bed9+
24
csv
15
bigBed narrowPeak
5
bed bed9
5
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
5993
Homo sapiens
Biosample type
1981
cell line
1896
tissue
1757
primary cell
401
in vitro differentiated cells
3
stem cell
Organ
712
epithelium
547
kidney
328
connective tissue
308
brain
276
musculature of body
230
lung
212
pancreas
206
intestine
178
vasculature
166
limb
163
bodily fluid
162
heart
156
skin of body
154
blood
134
embryo
129
blood vessel
128
large intestine
109
extraembryonic component
93
eye
91
liver
85
stomach
66
bone element
66
mammary gland
64
prostate gland
62
adipose tissue
59
small intestine
54
lymph node
54
penis
54
placenta
48
adrenal gland
48
ureter
47
artery
37
gonad
37
thymus
31
esophagus
30
spinal cord
26
spleen
25
uterus
20
testis
18
lymphoid tissue
17
vein
16
lymphatic vessel
16
ovary
16
thyroid gland
14
mouth
14
nerve
12
bronchus
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
1
pericardium
Project
5667
AMP
281
KPMP
57
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
6928
hg19
GRCh38
hg18
assembly!
GRCh38
hg18
month_released!
August, 2017
June, 2021
BIOSAMPLE
TYPE
6040 results
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table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
gene expression
accessible chromatin
differential activity
variant allelic effects
eQTL
chromatin state
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
Fine-mapped variants
representative DNase hypersensitivity sites
cell line
A549
21
19
1
2
1
EndoC_BH1
1
1
1
8
7
3
1
MCF-7
9
6
2
3
1
breast cancer cell
11
9
K562
7
7
1
2
1
+ See 756 more…
tissue
heart
37
20
1
1
3
2
2
stomach
40
21
1
1
3
kidney
29
14
2
1
7
1
1
1
brain
29
16
3
1
1
1
1
lung
33
17
1
+ See 234 more…
primary cell
CD8-positive, alpha-beta T cell
7
4
30
3
3
1
common myeloid progenitor, CD34-positive
27
14
monocyte
2
2
1
15
5
1
2
1
1
B cell
14
10
2
3
CD14-positive monocyte
8
19
+ See 384 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
neural progenitor cell
5
5
2
7
adipocyte
4
6
1
1
1
4
embryonic stem cell
1
1
1
6
5
cardiomyocytes
11
+ See 120 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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