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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1592
candidate regulatory elements
1007
target gene predictions
791
histone modifications
772
binding sites
600
gene expression
469
accessible chromatin
167
differential activity
134
variant allelic effects
66
chromatin state
40
eQTL
6
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
Date released
2390
February, 2021
1602
September, 2022
282
September, 2023
268
June, 2020
253
May, 2021
137
May, 2020
130
February, 2024
99
October, 2022
83
August, 2021
70
March, 2023
56
January, 2021
46
March, 2020
43
May, 2022
39
February, 2020
31
August, 2017
30
March, 2024
26
February, 2023
26
November, 2022
19
April, 2020
19
January, 2020
9
August, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2022
1
July, 2020
1
June, 2021
1
November, 2019
1
November, 2020
Available data
4805
bed bed3+
717
tsv
159
bigWig
108
txt
34
bed bed9+
16
bigBed narrowPeak
4
bam
4
bigBed bed9
3
bed gappedPeak
3
xls
Organism
5622
Homo sapiens
Biosample type
1986
cell line
1915
tissue
1762
primary cell
in vitro differentiated cells
4
stem cell
Organ
690
epithelium
546
kidney
311
brain
288
connective tissue
277
musculature of body
231
lung
213
pancreas
210
intestine
177
vasculature
166
limb
165
bodily fluid
161
heart
156
blood
148
skin of body
131
large intestine
130
blood vessel
111
embryo
105
extraembryonic component
88
liver
87
eye
86
stomach
66
bone element
64
mammary gland
64
prostate gland
63
adipose tissue
60
small intestine
54
lymph node
54
placenta
48
adrenal gland
48
penis
48
ureter
47
artery
37
gonad
37
thymus
31
esophagus
30
spinal cord
26
spleen
25
uterus
20
testis
18
lymphoid tissue
18
vein
16
ovary
16
thyroid gland
14
lymphatic vessel
14
mouth
14
nerve
12
bronchus
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
1
pericardium
Project
5298
AMP
281
KPMP
57
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
6577
hg19
GRCh38
hg18
assembly!
GRCh38
hg18
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
5669 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
gene expression
accessible chromatin
differential activity
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
Fine-mapped variants
cell line
A549
21
19
1
2
1
EndoC_BH1
1
1
1
8
7
3
1
MCF-7
9
6
2
3
1
breast cancer cell
11
9
K562
7
7
1
2
1
1
+ See 757 more…
tissue
heart
37
20
1
1
3
2
2
stomach
40
21
1
1
3
kidney
29
14
2
1
7
1
1
1
brain
29
16
3
1
1
1
1
lung
33
17
1
+ See 235 more…
primary cell
CD8-positive, alpha-beta T cell
7
4
30
3
3
1
common myeloid progenitor, CD34-positive
27
14
monocyte
2
2
1
15
5
1
2
1
1
B cell
14
10
2
3
CD14-positive monocyte
8
19
+ See 384 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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