Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1344
candidate regulatory elements
810
target gene predictions
482
gene expression
315
accessible chromatin
292
histone modifications
168
binding sites
135
variant allelic effects
62
chromatin state
47
differential activity
40
eQTL
6
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
2
Fine-mapped variants
1
pQTL
1
representative DNase hypersensitivity sites
Date released
1313
September, 2022
1277
February, 2021
229
May, 2021
162
February, 2024
142
May, 2020
137
June, 2020
81
August, 2021
61
March, 2023
47
March, 2020
44
November, 2022
39
February, 2020
36
May, 2022
29
August, 2017
29
March, 2024
29
October, 2022
24
February, 2023
21
January, 2020
9
August, 2018
4
September, 2023
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2022
1
July, 2020
1
June, 2021
1
November, 2019
1
November, 2020
1
October, 2019
Available data
3093
bed bed3+
489
tsv
117
bigWig
108
txt
27
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
5
bed bed9
4
bam
3
bed gappedPeak
3
xls
Organism
3679
Homo sapiens
Biosample type
cell line
1913
tissue
1406
primary cell
405
in vitro differentiated cells
stem cell
Organ
493
epithelium
374
kidney
283
connective tissue
265
musculature of body
247
brain
182
intestine
166
pancreas
160
limb
155
lung
154
heart
131
vasculature
107
extraembryonic component
103
blood vessel
103
large intestine
101
skin of body
86
stomach
84
eye
76
liver
68
embryo
63
adipose tissue
60
small intestine
52
placenta
48
adrenal gland
48
ureter
43
penis
39
artery
38
mammary gland
37
thymus
31
esophagus
31
gonad
27
spinal cord
26
spleen
21
bone element
20
prostate gland
16
ovary
16
thyroid gland
16
vein
14
lymphoid tissue
14
nerve
14
testis
14
uterus
13
bodily fluid
12
blood
11
bronchus
11
mouth
10
breast
9
bone marrow
8
lymphatic vessel
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
2
pituitary gland
1
pericardium
Project
3725
AMP
281
KPMP
57
T1D
19
LungMap
5
ITG
2
community
Genome assembly (visualization)
4235
hg19
GRCh38
3
hg18
assembly!
GRCh38
biosample_type!
stem cell
cell line
BIOSAMPLE
TYPE
3725 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
gene expression
accessible chromatin
histone modifications
binding sites
variant allelic effects
chromatin state
differential activity
eQTL
caQTL
hQTL
sQTL
variant to gene
meQTL
other
Fine-mapped variants
pQTL
representative DNase hypersensitivity sites
tissue
heart
37
20
3
2
1
1
2
stomach
40
21
1
3
1
kidney
29
14
7
1
2
1
1
1
brain
29
16
1
1
3
1
1
lung
33
17
1
+ See 234 more…
primary cell
CD8-positive, alpha-beta T cell
7
3
3
2
30
1
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
2
2
monocyte
1
15
4
2
1
1
2
1
1
CD14-positive monocyte
8
19
+ See 313 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
4
neural progenitor cell
5
5
7
2
embryonic stem cell
1
6
1
1
5
cardiomyocytes
11
+ See 120 more…
See all biosamples
Download