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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
783
histone modifications
775
binding sites
734
candidate regulatory elements
564
gene expression
551
target gene predictions
413
accessible chromatin
162
differential activity
92
variant allelic effects
54
chromatin state
9
eQTL
5
caQTL
5
hQTL
3
meQTL
3
sQTL
2
other
1
representative DNase hypersensitivity sites
Date released
1946
February, 2021
755
September, 2022
285
September, 2023
261
May, 2021
226
June, 2020
153
February, 2024
99
October, 2022
94
May, 2020
64
March, 2023
56
August, 2021
56
January, 2021
41
May, 2022
27
November, 2022
22
March, 2020
19
April, 2020
16
February, 2020
15
August, 2017
9
August, 2018
2
February, 2023
2
January, 2020
2
March, 2024
1
January, 2022
1
July, 2020
1
June, 2021
1
November, 2019
1
November, 2020
1
October, 2019
Available data
3364
bed bed3+
677
tsv
135
bigWig
108
txt
34
bed bed9+
24
csv
16
bigBed narrowPeak
5
bed bed9
5
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
4110
Homo sapiens
Biosample type
1987
cell line
tissue
1762
primary cell
405
in vitro differentiated cells
stem cell
Organ
666
epithelium
324
kidney
265
connective tissue
161
bodily fluid
153
blood
138
skin of body
136
pancreas
134
vasculature
106
embryo
94
lung
92
brain
85
blood vessel
65
mammary gland
55
bone element
54
lymph node
53
liver
52
penis
52
prostate gland
51
musculature of body
35
extraembryonic component
32
intestine
30
eye
28
artery
28
large intestine
26
heart
17
vein
16
lymphatic vessel
14
uterus
12
bronchus
11
bone marrow
10
pituitary gland
9
placenta
7
gonad
7
limb
6
mouth
6
spinal cord
6
testis
5
adipose tissue
5
esophagus
5
trachea
4
lymphoid tissue
3
nose
2
stomach
1
adrenal gland
1
pericardium
1
thyroid gland
Project
3790
AMP
281
KPMP
57
T1D
19
LungMap
9
community
Genome assembly (visualization)
4502
hg19
GRCh38
1
hg18
assembly!
GRCh38
biosample_type!
tissue
stem cell
BIOSAMPLE
TYPE
4156 results
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Clear Filters
histone modifications
binding sites
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
differential activity
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
cell line
A549
1
2
21
19
1
EndoC_BH1
1
1
8
1
7
3
1
MCF-7
2
3
9
6
1
breast cancer cell
11
9
K562
1
2
7
7
1
1
+ See 757 more…
primary cell
CD8-positive, alpha-beta T cell
30
7
3
4
3
1
common myeloid progenitor, CD34-positive
27
14
monocyte
2
1
15
2
5
1
2
1
1
B cell
14
2
10
3
CD14-positive monocyte
8
19
+ See 384 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
1
1
19
1
10
1
adipocyte
1
1
4
1
6
4
4
neural progenitor cell
2
5
7
5
embryonic stem cell
1
1
1
6
5
cardiomyocytes
11
+ See 120 more…
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