Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
937
candidate regulatory elements
518
target gene predictions
110
gene expression
108
accessible chromatin
89
histone modifications
variant allelic effects
36
binding sites
34
eQTL
20
chromatin state
5
differential activity
4
variant to gene
3
pQTL
2
Fine-mapped variants
2
sQTL
1
caQTL
1
other
Date released
917
September, 2022
633
February, 2021
63
June, 2020
39
August, 2021
32
March, 2020
31
May, 2021
28
March, 2024
24
February, 2023
23
February, 2020
19
August, 2017
19
January, 2020
17
November, 2022
9
February, 2024
6
March, 2023
2
January, 2018
2
May, 2020
2
May, 2022
1
April, 2019
1
August, 2020
1
August, 2022
Available data
1718
bed bed3+
115
tsv
29
bigWig
4
bigBed bed9
1
bam
Organism
1869
Homo sapiens
Biosample type
1983
cell line
1870
tissue
1681
primary cell
399
in vitro differentiated cells
4
stem cell
Organ
224
musculature of body
214
kidney
211
brain
178
intestine
151
limb
137
lung
126
heart
103
large intestine
84
stomach
77
pancreas
74
extraembryonic component
67
connective tissue
62
eye
60
small intestine
58
adipose tissue
49
epithelium
47
adrenal gland
45
placenta
45
ureter
43
liver
39
blood vessel
39
vasculature
37
thymus
30
gonad
28
embryo
26
esophagus
26
spleen
24
spinal cord
19
skin of body
16
ovary
15
artery
15
thyroid gland
14
lymphoid tissue
14
testis
12
nerve
12
prostate gland
11
bone element
11
uterus
10
breast
8
mouth
8
tongue
8
urinary bladder
7
skeleton
7
vagina
4
bodily fluid
3
blood
2
mammary gland
2
penis
2
pituitary gland
1
vein
Project
1865
AMP
5
ITG
Genome assembly (visualization)
2421
hg19
GRCh38
3
hg18
assembly!
GRCh38
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
1870 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
gene expression
accessible chromatin
histone modifications
binding sites
eQTL
chromatin state
differential activity
variant to gene
pQTL
Fine-mapped variants
sQTL
caQTL
other
tissue
stomach
40
21
1
3
1
heart
37
20
3
2
1
1
kidney
29
14
7
1
2
1
1
brain
29
16
1
1
3
1
lung
33
17
1
+ See 231 more…
See all biosamples
Download