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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1072
target gene predictions
872
histone modifications
811
binding sites
521
accessible chromatin
140
variant allelic effects
43
eQTL
43
gene expression
41
chromatin state
9
differential activity
6
caQTL
5
hQTL
5
sQTL
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
2
variant to gene
Date released
2401
February, 2021
1672
September, 2022
289
June, 2020
204
May, 2021
144
May, 2020
104
February, 2024
99
October, 2022
56
January, 2021
49
March, 2020
46
August, 2021
44
November, 2022
35
August, 2017
25
February, 2023
19
April, 2020
17
February, 2020
13
March, 2023
9
August, 2018
9
May, 2022
5
September, 2023
4
January, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2022
1
June, 2021
1
November, 2019
1
October, 2019
Available data
5123
bed bed3+
tsv
164
bigWig
108
txt
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
5
bed bed9
4
bam
3
bed gappedPeak
3
xls
Organism
5205
Homo sapiens
Biosample type
1958
cell line
1803
tissue
1155
primary cell
330
in vitro differentiated cells
4
stem cell
Organ
400
epithelium
296
kidney
295
brain
281
connective tissue
273
musculature of body
230
lung
207
intestine
164
bodily fluid
161
limb
155
blood
155
skin of body
145
heart
144
pancreas
131
vasculature
129
large intestine
125
embryo
109
extraembryonic component
99
blood vessel
92
eye
84
stomach
81
liver
67
mammary gland
63
prostate gland
61
bone element
60
small intestine
54
lymph node
54
penis
54
placenta
52
adipose tissue
48
ureter
47
adrenal gland
39
artery
37
thymus
35
gonad
29
esophagus
29
spinal cord
25
spleen
23
uterus
19
testis
17
lymphoid tissue
17
vein
15
ovary
15
thyroid gland
13
mouth
12
bronchus
12
nerve
11
lymphatic vessel
11
pituitary gland
10
bone marrow
9
breast
7
skeleton
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
1
pericardium
Project
5162
AMP
57
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
6834
hg19
GRCh38
4
hg18
assembly!
GRCh38
files.file_type!
bed bed9+
tsv
BIOSAMPLE
TYPE
5252 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
eQTL
gene expression
chromatin state
differential activity
caQTL
hQTL
sQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
cell line
A549
21
19
1
2
1
MCF-7
9
6
2
3
1
breast cancer cell
11
9
K562
7
7
1
2
1
1
EndoC_BH1
1
1
1
7
1
2
+ See 753 more…
tissue
stomach
40
21
1
3
heart
37
20
1
1
2
2
brain
29
16
3
1
1
1
lung
33
17
muscle of arm
33
16
1
+ See 202 more…
primary cell
CD8-positive, alpha-beta T cell
7
4
30
3
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
3
CD14-positive monocyte
8
19
CD4-positive, alpha-beta memory T cell
14
9
+ See 274 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
embryonic stem cell
1
1
1
6
5
neural progenitor cell
5
5
2
mesenchymal stem cell
3
3
1
1
1
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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