Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
28
candidate regulatory elements
16
target gene predictions
12
binding sites
5
histone modifications
4
accessible chromatin
1
variant allelic effects
Date released
28
February, 2021
28
September, 2022
4
June, 2020
3
October, 2022
2
May, 2021
1
February, 2024
Available data
66
bed bed3+
Organism
66
Homo sapiens
Biosample type
32
primary cell
29
cell line
3
in vitro differentiated cells
2
tissue
Organ
712
epithelium
547
kidney
331
connective tissue
308
brain
276
musculature of body
230
lung
212
pancreas
206
intestine
178
vasculature
166
limb
163
bodily fluid
162
heart
156
skin of body
154
blood
134
embryo
129
blood vessel
128
large intestine
109
extraembryonic component
93
eye
93
liver
85
stomach
66
mammary gland
65
bone element
64
adipose tissue
64
prostate gland
59
small intestine
54
lymph node
54
penis
54
placenta
48
adrenal gland
48
ureter
47
artery
37
gonad
37
thymus
31
esophagus
30
spinal cord
26
spleen
25
uterus
20
testis
18
lymphoid tissue
17
vein
16
lymphatic vessel
16
ovary
16
thyroid gland
14
mouth
14
nerve
12
bronchus
12
pituitary gland
10
bone marrow
10
breast
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
1
pericardium
Project
66
AMP
Genome assembly (visualization)
72
hg19
GRCh38
assembly!
GRCh38
month_released!
August, 2017
annotation_type!
chromatin state
BIOSAMPLE
TYPE
66 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
accessible chromatin
variant allelic effects
primary cell
mammary epithelial cell
3
1
4
1
mammary gland epithelial cell
3
3
1
1
fibroblast of mammary gland
2
1
2
1
1
myoepithelial cell of mammary gland
4
2
luminal epithelial cell of mammary gland
1
1
cell line
MCF-7
9
6
3
2
1
T47D
3
2
MCF 10A
3
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
tissue
mammary gland
1
1
Download