Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
39
target gene predictions
7
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
2
gene expression
Date released
65
September, 2022
46
February, 2021
7
June, 2020
5
May, 2021
3
August, 2017
2
March, 2024
1
February, 2024
1
March, 2020
1
October, 2022
Available data
129
bed bed3+
2
tsv
Organism
131
Homo sapiens
Biosample type
103
tissue
28
cell line
Organ
706
epithelium
538
kidney
329
connective tissue
308
brain
275
musculature of body
231
lung
215
pancreas
210
intestine
177
vasculature
165
bodily fluid
163
limb
157
skin of body
156
blood
154
heart
135
embryo
131
large intestine
128
blood vessel
109
extraembryonic component
95
liver
92
eye
86
stomach
67
mammary gland
66
bone element
64
prostate gland
63
adipose tissue
60
small intestine
54
lymph node
54
penis
54
placenta
48
adrenal gland
48
ureter
45
artery
37
gonad
37
thymus
31
esophagus
30
spinal cord
26
spleen
25
uterus
20
testis
18
lymphoid tissue
18
vein
16
lymphatic vessel
16
ovary
16
thyroid gland
14
mouth
12
bronchus
12
nerve
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
Project
131
AMP
Genome assembly (visualization)
170
hg19
GRCh38
assembly!
GRCh38
month_released!
February, 2020
BIOSAMPLE
TYPE
131 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
gene expression
tissue
large intestine
27
14
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
colonic mucosa
4
2
1
1
mucosa of rectum
4
2
1
+ See 6 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
HCT116
2
1
+ See 3 more…
See all biosamples
Download