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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1395
candidate regulatory elements
928
target gene predictions
857
histone modifications
795
binding sites
486
accessible chromatin
452
gene expression
112
variant allelic effects
107
differential activity
72
chromatin state
36
eQTL
5
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
1
representative DNase hypersensitivity sites
Date released
2314
February, 2021
1402
September, 2022
286
May, 2021
263
June, 2020
156
February, 2024
146
September, 2023
117
May, 2020
96
October, 2022
67
August, 2021
66
March, 2023
56
January, 2021
46
March, 2020
44
November, 2022
41
May, 2022
32
August, 2017
27
March, 2024
26
February, 2020
26
February, 2023
19
April, 2020
19
January, 2020
9
August, 2018
2
January, 2018
2
May, 2024
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2022
1
June, 2021
1
November, 2019
1
November, 2020
1
October, 2019
Available data
4611
bed bed3+
523
tsv
156
bigWig
34
bed bed9+
21
csv
21
txt
16
bigBed narrowPeak
8
bigBed bed9
5
bed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
5224
Homo sapiens
Biosample type
1928
cell line
1493
tissue
1446
primary cell
398
in vitro differentiated cells
4
stem cell
Organ
715
epithelium
kidney
338
connective tissue
314
brain
279
musculature of body
231
lung
216
pancreas
210
intestine
179
vasculature
limb
165
bodily fluid
162
heart
157
skin of body
156
blood
135
embryo
131
large intestine
130
blood vessel
109
extraembryonic component
liver
93
eye
86
stomach
67
mammary gland
66
adipose tissue
66
bone element
64
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
48
adrenal gland
48
ureter
47
artery
37
gonad
37
thymus
31
esophagus
30
spinal cord
26
spleen
25
uterus
20
testis
18
lymphoid tissue
18
vein
16
lymphatic vessel
16
ovary
16
thyroid gland
14
mouth
14
nerve
12
bronchus
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
1
pericardium
Project
5038
AMP
141
KPMP
57
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
6216
hg19
GRCh38
2
hg18
assembly!
GRCh38
organ_slims!
liver
limb
kidney
BIOSAMPLE
TYPE
5271 results
search-icon
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
gene expression
variant allelic effects
differential activity
chromatin state
eQTL
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
Fine-mapped variants
representative DNase hypersensitivity sites
cell line
A549
21
19
1
2
1
EndoC_BH1
1
1
1
7
8
1
3
MCF-7
9
6
2
3
1
breast cancer cell
11
9
K562
7
7
1
2
1
1
+ See 740 more…
tissue
heart
37
20
1
1
2
3
2
stomach
40
21
1
3
1
brain
29
16
3
1
1
1
1
lung
33
17
1
adrenal gland
28
17
1
1
+ See 196 more…
primary cell
CD8-positive, alpha-beta T cell
7
4
30
3
3
1
common myeloid progenitor, CD34-positive
27
14
monocyte
2
2
1
5
15
1
2
1
1
B cell
14
10
3
2
CD14-positive monocyte
8
19
+ See 315 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
1
4
1
4
neural progenitor cell
5
5
2
7
embryonic stem cell
1
1
1
6
5
cardiomyocytes
11
+ See 117 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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