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Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
245
gene expression
147
candidate regulatory elements
109
accessible chromatin
102
target gene predictions
92
differential activity
83
binding sites
49
histone modifications
41
variant allelic effects
5
chromatin state
5
eQTL
1
caQTL
1
pQTL
Date released
270
February, 2021
155
September, 2023
152
September, 2022
44
February, 2024
38
March, 2023
38
May, 2021
37
June, 2020
25
October, 2022
23
August, 2021
20
January, 2021
15
November, 2022
14
May, 2020
11
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
August, 2017
3
March, 2024
1
July, 2020
1
May, 2022
Available data
534
bed bed3+
316
tsv
78
txt
57
bigWig
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
880
Homo sapiens
Biosample type
610
primary cell
192
cell line
53
tissue
25
in vitro differentiated cells
Organ
715
epithelium
547
kidney
338
connective tissue
314
brain
279
musculature of body
231
lung
216
pancreas
210
intestine
179
vasculature
166
limb
165
bodily fluid
162
heart
157
skin of body
156
blood
135
embryo
131
large intestine
130
blood vessel
109
extraembryonic component
96
liver
93
eye
86
stomach
67
mammary gland
66
adipose tissue
66
bone element
64
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
48
adrenal gland
48
ureter
47
artery
37
gonad
37
thymus
31
esophagus
30
spinal cord
26
spleen
25
uterus
20
testis
18
lymphoid tissue
18
vein
16
lymphatic vessel
16
ovary
16
thyroid gland
14
mouth
14
nerve
12
bronchus
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
1
pericardium
Project
696
AMP
155
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
817
hg19
GRCh38
assembly!
GRCh38
BIOSAMPLE
TYPE
880 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
differential activity
binding sites
histone modifications
variant allelic effects
chromatin state
eQTL
caQTL
pQTL
primary cell
endothelial cell
9
4
1
2
1
2
1
1
epithelial cell of proximal tubule
16
2
1
1
1
glomerular endothelial cell
14
2
1
1
1
hepatocyte
8
1
1
2
1
1
2
endothelial cell of umbilical vein
6
1
4
2
1
1
+ See 123 more…
cell line
EndoC_BH1
8
7
1
3
1
K562
7
1
7
2
1
1
GM12878
2
1
2
2
1
1
GM06990
2
1
1
2
1
HAP-1
2
1
2
1
1
+ See 37 more…
tissue
pigmented layer of retina
20
breast epithelium
5
1
3
esophagus squamous epithelium
6
1
2
blood
2
kidney epithelium
1
1
+ See 11 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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