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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
275
gene expression
243
candidate regulatory elements
139
target gene predictions
106
accessible chromatin
94
differential activity
50
variant allelic effects
41
binding sites
29
histone modifications
4
eQTL
3
chromatin state
1
caQTL
Date released
300
February, 2021
234
September, 2022
160
September, 2023
44
February, 2024
38
March, 2023
34
May, 2021
33
June, 2020
25
August, 2021
23
May, 2020
20
January, 2021
15
November, 2022
11
February, 2023
10
February, 2020
9
March, 2020
7
April, 2020
7
October, 2022
6
August, 2018
4
March, 2024
3
August, 2017
1
July, 2020
1
May, 2022
Available data
606
bed bed3+
348
tsv
90
txt
58
bigWig
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
985
Homo sapiens
Biosample type
622
primary cell
265
tissue
72
cell line
26
in vitro differentiated cells
Organ
715
epithelium
547
kidney
336
connective tissue
314
brain
279
musculature of body
231
lung
216
pancreas
210
intestine
179
vasculature
166
limb
165
bodily fluid
162
heart
157
skin of body
156
blood
135
embryo
131
large intestine
130
blood vessel
109
extraembryonic component
96
liver
93
eye
86
stomach
67
mammary gland
66
adipose tissue
66
bone element
64
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
48
adrenal gland
48
ureter
47
artery
37
gonad
37
thymus
31
esophagus
30
spinal cord
26
spleen
25
uterus
20
testis
18
lymphoid tissue
18
vein
16
lymphatic vessel
16
ovary
16
thyroid gland
14
mouth
14
nerve
12
bronchus
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
1
pericardium
Project
796
AMP
160
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
919
hg19
GRCh38
assembly!
GRCh38
BIOSAMPLE
TYPE
985 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
chromatin state
caQTL
primary cell
endothelial cell
9
1
4
2
2
1
1
1
epithelial cell of proximal tubule
16
2
1
1
1
glomerular endothelial cell
14
2
1
1
1
hepatocyte
8
1
2
1
2
1
1
endothelial cell of umbilical vein
6
4
1
1
2
1
+ See 128 more…
tissue
kidney
7
29
14
1
1
1
2
1
right kidney
20
10
1
renal cortex interstitium
20
9
1
renal pelvis
19
9
1
1
left kidney
18
9
+ See 22 more…
cell line
EndoC_BH1
8
1
7
3
1
HEK293
3
1
1
2
1
ACHN
2
1
1
Caki2
2
1
1
RCC 7860
2
1
1
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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