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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
246
candidate regulatory elements
150
target gene predictions
111
accessible chromatin
93
differential activity
48
variant allelic effects
44
binding sites
31
histone modifications
7
eQTL
6
chromatin state
3
caQTL
Date released
288
February, 2021
238
September, 2022
155
September, 2023
59
February, 2024
40
May, 2021
38
March, 2023
31
June, 2020
21
August, 2021
20
January, 2021
19
May, 2020
15
November, 2022
13
February, 2020
11
February, 2023
9
March, 2020
9
October, 2022
7
April, 2020
6
August, 2017
6
August, 2018
4
March, 2024
4
May, 2022
1
July, 2020
Available data
637
bed bed3+
321
tsv
78
txt
60
bigWig
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
994
Homo sapiens
Biosample type
636
primary cell
277
tissue
54
cell line
27
in vitro differentiated cells
Organ
715
epithelium
547
kidney
336
connective tissue
314
brain
279
musculature of body
231
lung
216
pancreas
210
intestine
179
vasculature
166
limb
165
bodily fluid
162
heart
157
skin of body
156
blood
135
embryo
131
large intestine
130
blood vessel
109
extraembryonic component
96
liver
93
eye
86
stomach
67
mammary gland
66
adipose tissue
66
bone element
64
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
48
adrenal gland
48
ureter
47
artery
37
gonad
37
thymus
31
esophagus
30
spinal cord
26
spleen
25
uterus
20
testis
18
lymphoid tissue
18
vein
16
lymphatic vessel
16
ovary
16
thyroid gland
14
mouth
14
nerve
12
bronchus
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
1
pericardium
Project
810
AMP
155
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
967
hg19
GRCh38
assembly!
GRCh38
BIOSAMPLE
TYPE
994 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
chromatin state
caQTL
primary cell
endothelial cell
9
1
4
2
2
1
1
1
epithelial cell of proximal tubule
16
2
1
1
1
glomerular endothelial cell
14
2
1
1
1
hepatocyte
8
1
2
1
2
1
1
endothelial cell of umbilical vein
6
4
1
1
2
1
+ See 130 more…
tissue
muscle of arm
33
16
1
muscle of leg
27
14
1
muscle of back
28
13
pigmented layer of retina
20
psoas muscle
7
8
1
+ See 31 more…
cell line
EndoC_BH1
8
1
7
3
1
LHCN-M2
2
1
1
1
1
A673
2
2
SJCRH30
2
1
1
keratinocyte
3
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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