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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
52
candidate regulatory elements
48
gene expression
48
target gene predictions
35
accessible chromatin
33
differential activity
12
binding sites
11
histone modifications
11
variant allelic effects
10
eQTL
4
chromatin state
2
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
59
February, 2021
50
September, 2022
47
March, 2023
34
May, 2021
20
January, 2021
16
February, 2024
8
August, 2021
7
August, 2018
7
June, 2020
6
March, 2020
4
May, 2020
3
August, 2017
2
January, 2020
2
October, 2022
1
April, 2019
1
February, 2020
1
February, 2023
1
January, 2018
1
June, 2021
Available data
173
bed bed3+
72
tsv
24
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
270
Homo sapiens
Biosample type
138
primary cell
82
tissue
41
cell line
9
in vitro differentiated cells
Organ
715
epithelium
547
kidney
336
connective tissue
314
brain
279
musculature of body
231
lung
216
pancreas
210
intestine
179
vasculature
166
limb
165
bodily fluid
162
heart
157
skin of body
156
blood
135
embryo
131
large intestine
130
blood vessel
109
extraembryonic component
96
liver
93
eye
86
stomach
67
mammary gland
66
adipose tissue
66
bone element
64
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
48
adrenal gland
48
ureter
47
artery
37
gonad
37
thymus
31
esophagus
30
spinal cord
26
spleen
25
uterus
20
testis
18
lymphoid tissue
18
vein
16
lymphatic vessel
16
ovary
16
thyroid gland
14
mouth
14
nerve
12
bronchus
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
1
pericardium
Project
248
AMP
20
T1D
2
community
Genome assembly (visualization)
250
hg19
GRCh38
assembly!
GRCh38
BIOSAMPLE
TYPE
270 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
chromatin state
Fine-mapped variants
sQTL
variant to gene
primary cell
foreskin fibroblast
6
2
1
4
2
foreskin keratinocyte
11
4
pancreatic ductal cell
3
2
3
3
1
2
1
pancreatic alpha cell
3
3
4
3
1
pancreatic beta cell
3
3
4
3
1
+ See 14 more…
tissue
islet of Langerhans
11
1
2
2
1
1
10
3
2
2
2
body of pancreas
8
2
5
1
pancreas
5
5
2
1
1
1
1
endocrine pancreas
7
4
skin of prepuce of penis
1
1
cell line
EndoC_BH1
8
1
7
3
1
Panc1
2
2
EH
2
1
EL
2
1
ELR
2
1
+ See 5 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
pancreatic ductal cell
3
See all biosamples
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