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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
target gene predictions
872
histone modifications
810
binding sites
674
gene expression
521
accessible chromatin
167
differential activity
140
variant allelic effects
75
chromatin state
42
eQTL
6
caQTL
5
hQTL
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
1
representative DNase hypersensitivity sites
Date released
2577
February, 2021
838
September, 2022
289
June, 2020
281
September, 2023
162
February, 2024
150
May, 2021
126
May, 2020
99
October, 2022
90
August, 2021
69
March, 2023
44
November, 2022
43
May, 2022
39
February, 2020
35
August, 2017
30
March, 2024
28
January, 2021
26
February, 2023
20
January, 2020
19
April, 2020
12
March, 2020
9
August, 2018
2
January, 2018
2
May, 2024
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
1
November, 2019
1
November, 2020
1
October, 2019
Available data
4049
bed bed3+
794
tsv
161
bigWig
108
txt
34
bed bed9+
24
csv
13
bigBed narrowPeak
9
bigBed bed9
5
bed bed9
4
bam
3
bed gappedPeak
3
xls
Organism
4952
Homo sapiens
Biosample type
1755
cell line
1506
primary cell
1395
tissue
340
in vitro differentiated cells
1
stem cell
Organ
642
epithelium
472
kidney
276
connective tissue
238
brain
202
musculature of body
177
pancreas
156
lung
149
vasculature
147
intestine
136
bodily fluid
129
blood
118
skin of body
117
heart
117
limb
105
blood vessel
102
embryo
92
large intestine
84
eye
74
liver
73
extraembryonic component
60
stomach
51
adipose tissue
51
mammary gland
50
bone element
49
prostate gland
45
lymph node
43
penis
39
artery
39
small intestine
37
placenta
35
ureter
31
adrenal gland
27
gonad
23
esophagus
23
thymus
21
spinal cord
19
uterus
18
spleen
16
testis
14
lymphatic vessel
14
vein
13
lymphoid tissue
11
nerve
11
thyroid gland
10
bronchus
10
mouth
10
ovary
8
bone marrow
7
breast
6
tongue
5
trachea
5
urinary bladder
5
vagina
4
skeleton
2
nose
2
pituitary gland
1
pericardium
Project
4654
AMP
281
KPMP
29
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5604
hg19
GRCh38
hg18
assembly!
hg18
GRCh38
annotation_type!
sQTL
target gene predictions
BIOSAMPLE
TYPE
4999 results
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Clear Filters
candidate regulatory elements
histone modifications
binding sites
gene expression
accessible chromatin
differential activity
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
variant to gene
meQTL
other
pQTL
Fine-mapped variants
representative DNase hypersensitivity sites
cell line
A549
21
1
2
1
EndoC_BH1
1
1
8
7
3
1
breast cancer cell
11
9
MCF-7
9
2
3
1
H1-hESC
1
1
2
8
1
+ See 755 more…
primary cell
CD8-positive, alpha-beta T cell
7
30
3
3
1
common myeloid progenitor, CD34-positive
27
monocyte
2
1
15
5
1
2
1
endothelial cell
1
2
9
4
2
1
1
epithelial cell of proximal tubule
2
1
16
1
+ See 377 more…
tissue
heart
37
1
1
3
2
2
stomach
40
1
1
3
kidney
29
2
1
7
1
1
1
brain
29
3
1
1
1
1
islet of Langerhans
1
2
11
2
1
3
10
2
2
+ See 230 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
1
1
1
1
adipocyte
4
1
1
1
4
4
neural progenitor cell
5
2
7
embryonic stem cell
1
1
6
5
cardiomyocytes
11
+ See 112 more…
stem cell
H1-hESC
1
See all biosamples
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