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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1344
candidate regulatory elements
841
target gene predictions
653
gene expression
362
accessible chromatin
292
histone modifications
168
binding sites
157
differential activity
136
variant allelic effects
63
chromatin state
42
eQTL
6
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
1
representative DNase hypersensitivity sites
Date released
1313
September, 2022
1277
February, 2021
286
September, 2023
229
May, 2021
162
February, 2024
142
May, 2020
137
June, 2020
83
August, 2021
61
March, 2023
56
January, 2021
49
March, 2020
44
November, 2022
39
February, 2020
36
May, 2022
30
August, 2017
29
March, 2024
29
October, 2022
25
February, 2023
21
January, 2020
19
April, 2020
9
August, 2018
2
January, 2018
2
May, 2024
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2022
1
July, 2020
1
June, 2021
1
November, 2019
1
November, 2020
1
October, 2019
Available data
3174
bed bed3+
772
tsv
164
bigWig
108
txt
27
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
5
bed bed9
4
bam
3
bed gappedPeak
3
xls
Organism
4043
Homo sapiens
Biosample type
cell line
1915
tissue
1764
primary cell
405
in vitro differentiated cells
4
stem cell
Organ
675
epithelium
514
kidney
308
connective tissue
265
musculature of body
248
brain
186
pancreas
182
intestine
169
vasculature
160
limb
158
lung
154
heart
125
blood vessel
107
extraembryonic component
103
large intestine
101
skin of body
86
stomach
84
eye
75
liver
69
embryo
61
adipose tissue
60
small intestine
52
placenta
48
adrenal gland
48
ureter
44
artery
43
penis
38
mammary gland
37
thymus
31
esophagus
31
gonad
27
spinal cord
26
spleen
23
bone element
20
prostate gland
16
ovary
16
thyroid gland
16
vein
14
lymphatic vessel
14
lymphoid tissue
14
nerve
14
testis
14
uterus
13
bodily fluid
12
blood
12
bronchus
11
bone marrow
11
mouth
10
breast
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
2
pituitary gland
1
pericardium
Project
3726
AMP
281
KPMP
57
T1D
19
LungMap
5
ITG
2
community
Genome assembly (visualization)
4654
hg19
GRCh38
hg18
assembly!
hg18
GRCh38
biosample_type!
cell line
BIOSAMPLE
TYPE
4090 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
accessible chromatin
histone modifications
binding sites
differential activity
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
Fine-mapped variants
representative DNase hypersensitivity sites
tissue
heart
37
20
3
2
1
1
2
stomach
40
21
1
3
1
kidney
29
14
7
1
2
1
1
1
brain
29
16
1
1
3
1
1
lung
33
17
1
+ See 235 more…
primary cell
CD8-positive, alpha-beta T cell
7
4
3
3
30
1
common myeloid progenitor, CD34-positive
27
14
monocyte
2
15
5
2
1
1
2
1
1
B cell
14
10
2
3
CD14-positive monocyte
8
19
+ See 385 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
4
neural progenitor cell
5
5
7
2
embryonic stem cell
1
6
1
1
5
cardiomyocytes
11
+ See 120 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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