Annotation Matrix – Common Metabolic Diseases Genome Atlas

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

BIOSAMPLE

	TYPE
6657 results Clear Filters	candidate regulatory elements	target gene predictions	histone modifications	chromatin state	accessible chromatin	binding sites	Fine-mapped variants	variant allelic effects	eQTL	caQTL	hQTL	meQTL	pQTL	sQTL	other	variant to gene
tissue
heart	37	20	1	21	5	1		2
stomach	40	21	1	19	3
kidney	29	14	2	16	10	1		1	1
brain	29	16	3	18	2	1		1
muscle of arm	33	16		16	1			1

cell line
A549	21	19	1	18	1	2
MCF-7	9	6	2	5	1	3
K562	7	7	1	7	1	2
breast cancer cell			11			9
HepG2	2	3	5	2	2	2

primary cell
monocyte		2	86		18	1			1		2	1
common myeloid progenitor, CD34-positive	27	14		13
CD8-positive, alpha-beta T cell	7	5	30	1	4
B cell	13	10		8	6
CD4-positive, alpha-beta memory T cell	14	9		9

in vitro differentiated cells
hematopoietic multipotent progenitor cell	19	10	1	10	1	1
neural progenitor cell	5	5	14	4	10
adipocyte	4	6	1	6	3	1
embryonic stem cell		1	1	5	5	1
mesenchymal stem cell	3	3	1	2	1	1

stem cell
H1-hESC				1
mesenchymal stem cell		1
mesendoderm		1
undifferentiated ESC (H9 cell line)		1