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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
976
histone modifications
chromatin state
905
accessible chromatin
816
binding sites
124
variant allelic effects
Fine-mapped variants
63
eQTL
12
gene expression
6
caQTL
5
hQTL
3
meQTL
3
pQTL
3
sQTL
2
other
2
variant to gene
Date released
2412
February, 2021
1678
September, 2022
333
November, 2021
302
February, 2024
293
May, 2021
288
June, 2020
135
May, 2020
99
October, 2022
74
August, 2021
66
January, 2020
56
January, 2021
45
March, 2020
41
November, 2022
26
February, 2023
25
February, 2020
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5875
bed bed3+
535
bigWig
24
tsv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5901
Homo sapiens
Biosample type
2119
cell line
1875
tissue
1606
primary cell
343
in vitro differentiated cells
3
stem cell
Organ
547
epithelium
333
connective tissue
315
brain
310
kidney
287
musculature of body
238
lung
224
intestine
190
bodily fluid
181
blood
178
limb
177
embryo
169
heart
166
pancreas
164
skin of body
162
vasculature
134
large intestine
122
blood vessel
112
extraembryonic component
104
liver
98
eye
92
stomach
76
uterus
72
mammary gland
70
bone element
63
prostate gland
63
small intestine
57
adrenal gland
56
placenta
54
lymph node
54
penis
53
adipose tissue
51
ureter
46
artery
38
thymus
37
gonad
33
esophagus
30
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
16
vein
15
nerve
15
skeleton
14
bronchus
14
lymphatic vessel
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5533
AMP
333
ENCODE
58
T1D
19
LungMap
5
ITG
Genome assembly (visualization)
5948
hg19
930
GRCh38
4
hg18
annotation_type!
Fine-mapped variants
chromatin state
BIOSAMPLE
TYPE
5948 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
eQTL
gene expression
caQTL
hQTL
meQTL
pQTL
sQTL
other
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
MCF-7
9
6
2
1
3
+ See 759 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 223 more…
primary cell
monocyte
2
86
18
1
1
2
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
1
1
1
+ See 329 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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